Virus General Information

  Virus Name
Avian leukosis virus subgroup J (ALV-J)
  Lineage
Viruses; Riboviria; Pararnavirae; Artverviricota; Revtraviricetes; Ortervirales; Retroviridae; Orthoretrovirinae; Alpharetrovirus; Avian leukosis virus
  Virus Molecule Type
ssRNA-RT
  Sequence ID
MZ856317.1
  Genome Type
Non-segmented
  Related Host Bombyx mori cypovirus 1 satellite RNA
  External Link
 Taxon ID 1401444
 Virus-Host DB https://www.genome.jp/virushostdb/1401444

Virus Virion and Genome Information

    Virion Information
Non enveloped, icosahedral virion with a T=2* icosahedral symmetry, about 65 nm in diameter. Pentameric turrets sit on the outside of the capsid. The capsid is composed of only a single shell of protein.
    GENOME Information
Segmented dsRNA linear genome: 10 segments encode for 10-12 proteins. Segments size range from 1 to 4.2 kb. Genome total size is about 25 kb.

Virus-RNA -- Host-ncRNA Interaction

RNA Binding Site RNA Detail HncRNA Name Host Species External Link HncRNA Detail
5'UTR RNA Info gga-miR-1650 Gallus gallus miRBase HncRNA Info
GAG RNA Info mi-gag1318 Gallus gallus AntiVIRmiR HncRNA Info
GAG RNA Info mi-gag1365 Gallus gallus AntiVIRmiR HncRNA Info
GAG RNA Info mi-gag1623 Gallus gallus AntiVIRmiR HncRNA Info
GAG RNA Info mi-gag1971 Gallus gallus AntiVIRmiR HncRNA Info

Virus Sequence Information

>MZ856317.1 Avian leukosis virus ev/J isolate GD1804J6, complete genome TGTAGTGTTATGCAATACTCTTATGTAACGATGCAACAGCAATTTGCCTTATAAGGAAGAAAAAGGCACC GTACACATCGATTGGTGGAACTAGGATGGTATGATCATGGTATGATCATGCCTTATTTGGAAGGCAACAG ACGGGTCTCACATGGATTGGACGAACTCCTTAGCTCCGCCTTGCAGAGATGTTGTATTTAAGTGCCTAGC TCGATACAATAAACGCCATTTTACCTCCCACCACATTGGTGTGCACCTGGGTTGATGGCCGGACCGTCGA TTCCCTGACGACTACGAGCACCTGAATGAAGCAGAAGGCTTCATCTGGTGACCCCGACGTGATAGTTAGG GAATAGTGGTCGGCCACAGACGGCGTGGCGATCCTGTCCTCATCCGTCTCGCTTATTCGGGGAGCGGGCG ATGACCCTAGTAGAGGGGGCTGCGGCTTAGGAGGGCAGAAGCTGAGTGGCGTCGGAGGGAGCTCTACTGC AGGGAGCCCACGTACCCTACCGAGAACTCAGAGAGTCGTTGGAAGACGGGAAGGAAGCCCGACGACTGAG CGGTCCGCCCCAGACGTGGTTCTGGTTGCCTGGAGGATCAAGTATGGAAGCCGTCATAAAGGTGATTTCG TCCGCGTGTAAAACCTATTGCGGGAAAACCTCTCCTTCTAAGAAGGAAATAGGGGCCATGCTGTCCCTGC TACAAAAGGAAGGGTTGCTTGCGTCTCCCTCAGACTTGTACTCCCCGGGGTCCTGGGATCCCATTACCGC GGCGCTCTCCCAGCGAACAATGGTACTTGGAAAATCGGGGGAGTTAAAAACCTGGGGATTGGTTTTGGGG GCACTGAAGGCAGCTCGAGAGGAACAGGTTACATCTGAGCAGGCAAAGTTTTGGTTGGGACTAGGGGGAG GGAGGGTCTCTCCCCCAGGTCCGGAGTGCATTGAGAAACCAGCAACGGAGCGGCGAGCCGACAAAGGGGA GGAAGCGGGGGAAACAACTGCGCAGCGAGATGCGAAGACGGAGCCGGAGGAAACGGCCACACCTAAGACC GTTGGCACATCCTGCTATCACTGCGGAACAGCTATTGGCTGTAACTGCGCCACAGCCTCGGCTCCTCCTC CTCCTTATGTGGGGAGTGGTTTGTATCCTTCCCTGGCGGGGGTGGGAGAGCAGCAGGGCCAGGAGGGTGA CACACCTCCGGGGGCGGAACAGCCAAGGGCGGAGCCAGGGCATGCGAGTCAAGCTCCTGGACCGGCCCTG ACTGACTGGGCAAGGGTCAGGGAGGAGCTTGCAAATACTAGCCCGCCCGTGGTGGCCATGCCTGTAGTAA TTAAGACAGAGGGACCCGCCTGGACCCCTCTGGAGCCAAAATTGATCACAAGACTGGCTGATACGGTCAG AACTAAGGGCTTACGATCCCCGATTACTATGGCAGAAGTTGAGGCGCTTATGTCCTCCCCGCTGCTGCCG CATGACGTTACGAATCTAATGAGAGTTATTTTAGGACCTGCCCCCTATGCCTTGTGGATGGACGCTTGGG GTGTCCAATTACAGACGGTTATAGCGGCAGCTACCCGCGACCCCCGACACCCAGCGAATGGTCAAGGGCG GGGGGAACGGACTAACTTGGATCGCTTAAAGGGTCTAGCTGATGGGATGGTGGGCAACCCACAGGGTCAG GCCGCATTATTGAGACCGGGGGAATTGGTTGCTATTACGGCGTCGGCTCTCCAGGCGTTTAGAGAGGTTG CCCGGCTAGCGGAACCTGCAGGTCCATGGGCGGACATCACACAGGGACCATCTGAGTCCTTTGTCGATTT CGCCAATAGGCTTATAAAGGCGGTTGAGGGGTCAGATCTCCCGCCTTCAGCGCGAGCTCCGGTGATCATT GACTGCTTTAGGCAGAAGTCACAGCCAGATATCCAGCAGCTTATACGGGCAGCACCCTCCACGCTGACCA CCCCAGGAGAGATAATCAAATATGTGCTAGATAGGCAAAAGACTGCCCCTCTTACGGATCAAGGCATAGC CGCGGCCATGTCGTCTGCTATCCAGCCCTTAGTTATGGCAGTAGTCAATAGGGAGAGGGATGGACAAACT GGGTCGGGTGGTCGTGCCCGAGGGCTCTGCTACACTTGTGGATCCCCGGGACATTATCAGGCGCAGTGCC CGAAAAAACGAAAGTCAGGAAACAGCCGTGAGCGATGTCAGCTGTGTGACGGGATGGGACACAACGCTAA ACAGTGCAGAAGGCGGGATGGCAACCAGGGCCAACGCCCAGGAAGAGGCCTCTCTTCGGGGCCGTGGCCC GTCTCTCAGCAGCCTGCCGTCTCGTTAGCGATGACAATGGAACATAAAGATCGCCCCTTGGTTAGGGTCA TTCTGACTAACACTGGGAGTCATCCGGTCAAACAGCGTTCGGTGTATATCACCGCGCTGTTGGACTCTGG AGCGGACATCACTATTATTTCGGAAGAGGATTGGCCTACTGACTGGCCGGTGGTGGACACCGCGAACCCG CAGATCCATGGGATAGGAGGGGGAATCCCCATGCGAAAATCTCGTGACATGATAGAGTTGGGGGTTATCA ACCGAGACGGGTCTTTGGAGCGACCCCTGCTCCTCTTCCCCGCGGTAGCTATGGTTAGAGGGAGTATCCT AGGAAGAGATTGTCTGCAGGGCCTAGGGCTCCGCTTGACAAATTTATAGGAGTCCACGTCTACCGGTATA GGGAGGGCCACTGTTCTTACTGTTGCGCTACATCTGGCTATTCCGCTCAAATGGAAGCCAGACCACACGC CTGTGTGGATTGACCAGTGGCCCCTCCCTGAGGGTAAACTTGTAGCGCTAACGCAATTAGTGGAAAAAGA ATTACAGTTAGGTCACATAGAACCCTCACTTAGTAGTTGGAACACACCTGTCTTTGTGATCCGGAAGGCT TCCGGGTCTTATCGCTTATTGCATGACCTGCGCGCTGTTAACGCCAAGCTTGTTCCTTTTGGGGCCGTCC AACAGGGGGCGCCAGTTCTCTCCGCGCTCCCGCGTGGCTGGCCCCTGATGGTCCTAGACCTCAAGGATTG CTTCTTTTCTATTCCTCTTGCGGAACAAGATCGCGAAGCTTTTGCATTTACGCTCCCCTCTGTGAATAAC CAGGCCCCCGCTCGAAGATTCCAATGGAAGGTCTTGCCCCAAGGGATGACCTGTTCTCCCACTATCTGTC AGTTGATAGTGGGTCAGGTACTTGAGCCCTTGCGACTCAAGCACCCATCTCTGTGCATGTTGCATTATAT GGATGATCTTTTGCTAGCCGCCTCAAGTCATGACAGGTTGGAAGCGGCAGGGGAGGAGGTTATTAGTACA TTGGAAAGAGCCGGGTTTACTATTTCGCCTGATAAGATCCAGAGGGAGCCCGGAGTACAATATCTTGGGT ACAAGTTAGGCAGTACGTATGTAGCACCCGTAGGCCTGGTCGCAGAACCCAGGATAGCCACCTTGTGGGA TGTTCAAAAGCTGGTGGGGTCACTTCAGTGGCTTCGTCCAGCGTTAGGAATCCCGCCACGATTGATGGGC CCCTTTTATGAGCAGTTACGAGGGTCAGATCCCAATGAGGCGAGGGAATGGAATCTAGACATGAAAATGG CCTGGAGAGAGATCGTACAGCTTAGCACCACTGCTGCCTTGGAACGATGGGACCCTGCCCTGCCTCTGGA AGGAGCGGTCGCTAGATGTGAACAGGGGGCAATAGGGGTCCTGGGACAGGGACTGTCCACACACCCAAGG CCATGTTTGTGGTTATTCTCCACCCAACCCACCAAGGCGTTTACTGCTTGGTTAGAAGTGCTCGCCCTTT TGATTACTAAGCTACGTGCTTCGGCAGTGCGGACCTTTGGCAAGGAGGTTGATATCCTCCTGTTGCCTGC ATGCTTTCGGGAGGACCTTCCGCTCCCGGAGGGGATCCTGTTAGCCCTTAAGGGGTTTGCAGGAAAAATC AGGAGTAGTGACACGCCATCTATTTTTGACATTGCGCGTCCACTGCATGTTTCTCTGAAAGTGAGGGTTA CCGACCACCCTGTACCGGGACCCACTGTCTTTACCGACGCCTCCTCAAGCACCCATAAGGGGGTGGTAGT CTGGAGGGAGGGTCCAAGGTGGGAGATAAAAGAAATAGCTGATTTGGGAGCAAGTGTACAACAACTGGAA GCACGCGCTGTAGCCATGGCACTTCTGCTGTGGCCGACAACGCCCATTAATGTAGTGACTGACTCCGCGT TTGTTGCGAAAATGTTACTCAAGATGGGTCAGGAGGGAGTCCCGTTTACAGCGGCGGCTTTTATTTTAGA GGATGCGTTAAGCCAAAGGTCAGCCATGGCCGCCGTTCTCCACGTGCGGAGTCATTCTGAAGTGCCAGGG TTTTTCACAGAAGGAAATGACGTGGCAGATAGCCAAGCCACCTTTCAAGCGTATCCTTTGAGAGAGGCTA AAGATCTTCATACTGCTCTCCATATTGGACCCCGTGCGCTATCCAAAGCGTGTAATATATCTATGCAGCA GGCTAGGGAGGTTGTTCAGACCTGCCCGCATTGTAATTCAGCCCCTGCGTTGGAGGCCGGGGTAAACCCT AGGGGTTTGGGACCCCTACAGATATGGCAGACAGACTTTACGCTTGAGCCTAGAATGGCCCCCCGTTCCT GGCTCGCTGTTACTGTGGATACCGCCTCATCGGCGATAGTCGTAACTCAGCATGGCCGTGTCACATCGGT TGCTGCACAACATCATTGGGCCACGGCTATCGCCGTTTTGGGAAGACCAAAGGCCATAAAAACAGATAAT GGATCCTGCTTCACGTCTAAATCCACGCGAGAGTGGCTCGCAAGATGGGGGATAGCACACACCACCGGGA TTCCGGGTAATTCCCAGGGTCAAGCTATGGTAGAGCGGGCCAACCGGCTCCTGAAAGATAAGATCCGTGT GCTTGCGGAGGGGGACGGCTTTATGAAAAGAATCCCCACCAGCAAACAGGGGGAACTACTAGCCAAGGCA ATGTATGCCCTCAATCACTTTGAGCGTGGTGAAAACACAAAAACACCGATACAAAAACACTGGAGACCTA CCATCCTTACAGAAGGACCCCCGGTTAAAATACGAATAGAGACAGGGGAGTGGGAAAAAGGATGGAACGT GCTAGTCTGGGGACGAGGTTATGCCGCTGTGAAAAACAGGGACACTGATAAGGTTATTTGGGTACCTTCT CGGAAAGTTAAACCGGACATCACCCAAAAGGATGAGGTGACTAAGAAAGATGAGGCGAGCCCTCTCTTTG CAGGCATTTCTGACTGGGCACCCTGGGAAGGTGAGCAAGAAGGACTCTAAGAAGAAGCCGCCAGCAACAA GCAAGAAAGACCCGGAGAAGACACCCTTGCTGCCATCGAGAGGTTACTTCTTCTTTCAAATGATACTTGT GTGCGTGGTTATTATTTCCGTCGTCCCAGGGGTGGGGGGAGTTCATCTGATGCGACAACCAGGAAACGTG TGGGTCGCCTGGGCAAATAAGACAGGTCGAACAGATTTTTGCCTTAGTCTACAGTCAGCGACCTCACCGT TCCGCACCTGCTTGATAGGCATTCCACAGTATCCTCTGAACGCCTTTGAGGGGTATGTCACTAATGTTAC TGCCTGCAATAGCACCGAGTTAGCCAACCAAACAGCATGCTTGATACAGGCTCTAAATACAACCCTCCCT TGGGACCCCCAAGAATTAGATATTTTAGGGTCCCAGATGATCAAGAACGGAACAACACGTACGTGTGTTA CCTTTGGTTCGGTGTGCTATGAGAACAATCGCAGTAGAGTCTGCCACAATTTTGATGGGAATTTTAATGG GACTGGTGGGGTGGAAGCAGAATTGCGTGACCTCATAGCAAAATGGAGCAAAGATGACCCTCGTATAAGA CCCTATGTCAACCAATCATGGACGGTGGTAAGTCCAATGAACACAGAGAGTTTTTCGATAAGTAGTAGAT ACTGTGGATTCACCAGCAACGAGACTCGTTATTATAGAAGGAACTTTTCTGATTGGTGTGGTTCAAAAGG GGGAAACTGGTCAGCGGGATACAGTAATGGGACAGAATGTTCCAATGGCACGGCGGATTGTGGTGGTAAT TGCACAGCGGAATGGAATTATTATGCATATGGGTTTACCTTCGAGAATAAGTCAGAGATATTGTGGAATA ATGGGACTGCTAAGGCACTCCCCCCAGGAATTTTCTTGATTTGTGGGGACAGGGCTTGGCAGGGCATCCC GAGTAATGCCTTGGGAGGGCCCTGTTATCTAGGACAATTGACTATGCTCTCTCCTAACTTTACCACCTGG ATGACGTATGGGCCGAACATTACGGGTCACCGCCGTAGCAGGCGCTCGGTGAGTCATCTCTCGCCTGACT GCGGTGATGAGCTACAGCTATGGAGTGCGACAGCCCGGATATTTGCTTCTTTCTTTGCTCCTGGTGTAGC CGCAGCACAGGCCTTAAAGGAGATTGAACGCTTGGCATGTTGGTCGGTTAAGCAAGCGAATTTAACATCA CTGATATTGAATGCGATGCTGGAGGACATGAACAGCATCCGGCACGCGGTGTTGCAGAATCGAGCAGCCA TCGATTTCTTACTCCTGGCGCAAGGACACGGGTGTCAAGACGTGGAAGGAATGTGCTGCTTTAATCTCAG CGATCACAGTGAGTCCATTCACAAGGCGCTTCAAGCCATGAAGGAACATACAGAGAAGATACAGGTGGAA GATGATCCCATAGGGGATTGGTTTACGCGCACGTTTGGTGATCTAGGAAGGTGGCTCGCGAAAGGTGTTA AGACGCTGCTGTTTGTCTTGCTTGTCATAGTCTGTCTATTAGCTATCGTTCCATGTATAATCAAGTGCTT CCAGGATTGTCTATCGAGAACAATGAATCAGTTTATGGACGACCGCATAAGATATCATAGAGTTATGGAG CGGCTGTAAGCTGCCGCGGGTAGGGCATAAAGCTTGCGAATCGGGCTGTAACGGGGCAAGGCTTGACTGA GGGGACAGCGGCATGTATAGGCGGAAAGCGGGGCTTCGGTTGTACGCGGTTAGGAGTCCCCTCAGGATAT AGTGGTTACGCTTTCGCATAGGGAGGGGGAGATGTAGTCTTATGCAATACTTTTATGTAACGATGAAACA GCAATATGCCTTATAAGGAGTGAAAAGGCACCGTACACATCGATTGGTGGAACTAGGATGGTATGATCAT GGTATGATCATGCCTTATTTGGAAGGCAACAGACGGGTCTCACATGGATTGGACGAACTCCTTAGCTCCG CCTTGCAGAGATGTTGTATTTAAGTGCCTAGCTCGATACAATAAACGCCATTTTACCTCCCACCACATTG GTGTGCACCTGGGTTGATGGCCGGACCGTCGATTCCCTGACAACTACGAGCACCTGCATGAAGCGGATGG CTTCA
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