Details of Virus RNA

  Strain Information Strain Name
Dengue virus 4 (strain H241)
Strain Family
Flaviviridae
RNA Binding Site
5'UTR
  Virus Information Virus Name
Dengue virus 4 (DENV4)
Taxonomy ID 11070

Full list of proteins interacting with the 5'UTR of this Strain

Protein Name Uniprot ID Host Species Pro Info Detection Method Infection Cell Cell ID Cell Originated Tissue Infection Time Interaction Score Fold Change
Lupus La protein P05455 Homo sapiens Pro Info UV cross-linking (UVX) and immunoprecipitation (IP) U937 Cells (Human histiocytic lymphoma cell) . Lymphoma . . .

Virus RNA Sequence Information

>GQ398256.1 Dengue virus 4 strain DENV-4/SG/06K2270DK1/2005, complete genome AGTTGTTAGTCTGTGTGGACCGACAAGGACAGTTCCAAATCGGAAGCTTGCTTAACACAGTTCTAACAGT TTGTTTTAAATAGAGAGCAGATCTCTGGAAAAATGAACCAACGAAAAAAGGTGGTCAGACCACCTTTCAA TATGCTGAAACGCGAGAGAAACCGCGTATCAACCCCTCAAGGGTTGGTGAAGAGATTCTCAACCGGACTT TTCTCCGGGAAAGGACCTTTGCGGATGGTGCTAGCATTCATCACGTTTTTGCGGGTCCTTTCCATCCCAC CAACAGCAGGGATTCTGAAAAGATGGGGACAGTTGAAAAAGAACAAGGCCATCAAAATACTGATTGGATT CAGGAAGGAGATAGGTCGCATGTTAAACATCTTGAATAGGAGAAGAAGGTCAACAATGACATTGCTGTGT TTGATTCCCACCGTAATGGCGTTTCACTTGTCAACAAGAGATGGCGAACCCCTCATGATAGTGGCAAAAC ACGAAAGGGGGAGACCTCTCTTGTTTAAGACAACAGAAGGAATCAACAAATGTACCCTTATTGCTATGGA CCTGGGTGAAATGTGCGAAGACACTGTCACGTACAAGTGTCCTCTACTGGTCAACACCGAACCTGAAGAC ATTGATTGCTGGTGCAATCTCACGTCCACCTGGGTCATGTACGGGACATGCACCCAGAACGGAGAACGGA GACGAGAGAAGCGCTCAGTAGCTTTAACACCACATTCAGGAATGGGATTGGAAACAAGAGCTGAGACATG GATGTCATCGGAAGGGGCTTGGAAACATGCTCAGAGAGTAGAAAGCTGGATACTCAGAAACCCAGGATTC GCGCTCTTGGCAGGATTCATGGCTTATATGATTGGGCAAACAGGAATCCAGCGAACTGTTTTCTTTGTCC TGATGATGCTAGTCGCCCCATCCTACGGAATGCGATGCGTAGGGGTAGGGAACAGAGACTTTGTGGAAGG AGTCTCGGGTGGAGCATGGGTCGACTTGGTGCTAGAACATGGAGGATGCGTCACAACCATGGCCCAGGGA AAACCAACCTTGGATTTTGAATTGACCAAGACAACAGCCAAGGAAGTGGCTCTGTTAAGAACTTATTGCA TTGAAGCCTCGATATCAAACATAACCACGGCAACAAGATGTCCAACGCAAGGAGAGCCTTATCTCAAAGA GGAGCAAGACCAACAGTACATTTGCCGGAGAGACGTGGTAGACAGAGGGTGGGGCAATGGCTGTGGCTTA TTTGGAAAAGGAGGAGTTGTGACATGTGCGAAGTTTTTATGCTCGGGGAAGATAACAGGCAATCTGGTCC AAATTGAAAACCTTGAATACACAGTAGCAGTAACAGTCCACAATGGAGACACCCATGCAGTAGGAAATGA CACATCCAGCCATGGAGTGACAGCCACGATAACTCCTAGGTCACCATCGGTAGAAGTTAAATTGCCGGAC TATGGAGAACTAACACTTGATTGCGAACCCAGGTCCGGAATTGATTTTAATGAGATGATCCTGATGAAAA TGAAAAAGAAAACGTGGCTTGTGCATAAGCAATGGTTTTTAGACCTACCTCTACCATGGACGGCAGGAGC AGACACATCAGAAGTTCATTGGAATCATAAAGAGAGAATGGTGACGTTCAAGGTTCCTCATGCCAAGAGA CAGGATGTGACAGTGCTAGGATCTCAGGAGGGAGCTATGCATTCTGCCCTCGCCGGAGCCACAGAAGTGG ATTCTGGTGATGGAAATCACATGTTTGCAGGACATCTCAAGTGCAAAGTCCGCATGGAGAAATTGAGAAT TAAAGGAATGTCATACACGATGTGTTCAGGAAAGTTCTCAATTGACAAAGAGATGGCAGAAACACAGCAT GGAACAACAGTGGTGAAAGTCAAGTATGAAGGCGCTGGAGCTCCGTGTAAAGTCCCCATAGAGATAAGAG ATGTGAACAAGGAAAAAGTGGTCGGGCGTATCATCTCATCTACCCCTTTTGCTGAGAATACCAACAGCGT AACCAACATAGAATTAGAACCCCCTTTTGGGGACAGCTACATAGTGATAGGTGTTGGAGAGAGTGCATTA ACACTCCATTGGTTCAGAAAAGGGAGCTCCATTGGTAAGATGTTTGAGTCCACATACAGAGGTGCAAAAC GAATGGCCATTCTAGGTGAAACAGCTTGGGATTTTGGTTCTGTTGGTGGACTGTTCACATCATTGGGAAA GGCTGTACACCAGGTTTTTGGAAGTGTGTATACAACCATGTTTGGAGGGGTCTCATGGATGGTTAGAATC CTAATTGGGTTCTTAGTATTGTGGATTGGCACGAATTCAAGAAACACTTCAATGGCAATGACATGCATAG CTGTTGGAGGAATCACTCTGTTTCTAGGTTTCACAGTTCAAGCAGACATGGGTTGTGTGGTGTCATGGAA TGGGAAGGAATTGAAATGTGGAAGCGGAATTTTTGTGGTTGACAACGTGCACACTTGGACAGAACAGTAC AAATTTCAACCAGAGTCCCCAGCGAGACTAGCGTCTGCAATATTGAATGCCCACAAAGATGGGGTCTGTG GAATTAGATCAACCACGAGGCTGGAAAATGTTATGTGGAAGCAAATAACCAACGAGCTAAACTATGTTCT CTGGGAAGGAGGACATGACCTCACTGTAGTGGCTGGGGACGTGAAGGGGGTGTTAACCAAAGGCAAGAGA GCACTCACACCTCCAGTGAATGATCTAAAATATTCATGGAAGACATGGGGGAAAGCAAAAATCTTTACCC CAGAAGCAAGAAATAGTACGTTTTTAATAGACGGACCAGACACCTCCGAATGCCCCAATGAGCGAAGAGC ATGGAACTTTTTTGAGGTAGAAGACTATGGATTTGGCATGTTTACGACCAACATATGGATGAAATTCCGA GAAGGAAGTTCAGAAGTGTGTGACCATAGATTAATGTCGGCGGCAATCAAAGATCAGAAAGCTGTGCATG CTGACATGGGTTATTGGATAGAGAGCTCAAAAAACCAGACCTGGCAGATAGAGAAAGCATCCCTTATTGA AGTGAAAACATGTCTGTGGCCCAAAACCCACACGCTGTGGAGCAATGGAGTGTTGGAAAGTCAGATGCTC ATTCCAAGATCATATGCAGGCCCCTTTTCACAGCACAATTACCGTCAGGGCTATGCCACGCAAACCGTGG GCCCATGGCACCTAGGCAAATTGGAGATAGACTTTGGAGAATGCCCCGGGACAACAGTCGCAATTCGGGA GGATTGTGATCACAGAGGCCCATCTTTGAGAACCACCACTGCATCTGGAAAACTGGTCACGCAATGGTGC TGCCGCTCCTGCACGATGCCTCCCTTAAGGTTCTTGGGAGAAGATGGATGTTGGTATGGGATGGAGATCA GGCCTTTGAGTGAAAAAGAAGAGAACATGGTCAAATCACAGGTAACGGCCGGACAGGGCACATCAGAAAC TTTTTCTATGGGGCTGCTATGCCTGACCTTGTTTGTGGAAGAATGCTTGAGGAGAAGAGTCACTAGGAAA CACATGATATTGGTTGTGGTAATCACCTTTTGTGCTATCATCCTAGGAGGTCTCACATGGATGGACTTAC TACGAGCCCTTATCATGTTAGGGGATACTATGTCTGGTAGAATAGGAGGACAGATTCACCTAGCCATCAT GGCAGTGTTCAAGATGTCACCAGGATATGTGCTGGGTGTGTTTTTAAGGAAACTTACTTCAAGAGAGACA GCGCTAATGGTAATAGGAATGGCCATGACAACGGTGTTTTCAATCCCACATGACCTCATGGAACTCATTG ATGGAATATCATTGGGGTTGATATTACTAAAAATAGTAACACATTTTGATAACACCCAAGTGGGAACCCT AGCCCTTTCCTTGACTTTTTTAAGATCAACAATACCATTAGTCATGGCTTGGAGGACCATTATGGCTGTG TTCTTTGTGGTCACACTCATTCCTTTGTGCAGGACAAGCTGTCTTCAAAAACAGTCCCATTGGGTAGAAA TAACAGCACTCATCCTAGGAGCCCAGGCTTTGCCAGTGTACCTAATGACTCTCATGAAAGGAGCCTCAAG GAGATCTTGGCCTCTTAATGAGGGCATAATGGCTGTGGGTTTGGTGAGCCTCTTAGGAAGCGCCCTCTTG AAGAATGATGTTCCTTTGGCTGGCCCAATGGTGGCAGGAGGCTTGCTTCTAGCGGCTTACGTAATGAGTG GTAGCTCAGCAGACCTGTCACTAGAGAAAGCTGCCAACGTGCAGTGGGATGAAATGGCGGACATAACTGG CTCAAGCCCAATCATAGAAGTGAAGCAGGATGAAGATGGCTCTTTCTCCATACGGGACGTCGAGGAAACC AATATGATAACTCTCTTGGTGAAACTGGCACTGATAACAGTATCAGGTCTTTACCCCTTGGCAATTCCAG TCACAATGGCATTATGGTATATTTGGCAAGTGAAGACACAAAGATCAGGAGCTCTGTGGGACGTCCCCTC ACCCGCTGCCACCCAGAAAGCCACACTGTCTGAAGGAGTGTATAGGATCATGCAAAGAGGGCTGTTTGGG AAAACTCAGGTTGGAGTAGGAATACACATGGAAGGCGTATTTCACACAATGTGGCATGTAACAAGGGGAT CAGTGATCTGCCATGAGACAGGGAGATTAGAGCCATCTTGGGCTGACGTCAGGAACGACATGATATCATA CGGTGGGGGATGGAGGCTCGGAGACAAATGGGACAAAGAAGAAGATGTTCAGGTCTTAGCCATAGAACCA GGGAAAAATCCCAAACATGTCCAAACGAAACCTGGCCTTTTCAAGACCCTAACTGGAGAAATTGGAGCAG TAACTCTGGATTTCAAACCCGGAACGTCTGGCTCTCCCATCATTAATAAGAAAGGAAAAGTTATTGGACT CTATGGAAATGGAGTAGTTACCAAATCAGGTGATTATGTCAGTGCCATAACGCAAGCCGAGAGAATTGGT GAGCCAGATTATGAAGTAGATGAGGACATTTTTCGAAAGAAAAGATTAACCATAATGGATTTACACCCCG GAGCTGGAAAGACAAAAAGAATCCTCCCATCAATAGTCAGAGAGGCTTTAAAAAGGAGGCTGCGAACCCT GATTTTGGCTCCCACGAGAGTGGTGGCGGCCGAGATGGAAGAGGCCCTACGTGGATTGCCAATCCGTTAT CAGACTCCAGCTGTGAAATCAGAGCACACAGGAAGAGAGATTGTAGACCTCATGTGTCATGCAACCTTCA CAACAAGACTTTTGTCATCAACCAGGGTTCCAAATTATAACCTCATAGTGATGGATGAAGCACATTTCAC TGACCCTTGCAGTGTCGCGGCTAGAGGATACATTTCAACCAGGGTGGAAATGGGAGAGGCAGCAGCTATC TTCATGACTGCAACCCCTCCTGGAGCGACAGATCCCTTCCCCCAGAGCAACAGCCCAATAGAAGACATCG AGAGGGAAATTCCAGAGAGGTCATGGAACACAGGGTTCGACTGGATAACAGACTACCAAGGGAAAACTGT GTGGTTTGTTCCCAGCATAAAAGCTGGAAATGACATTGCAAATTGTTTGAGAAAGTCGGGAAAGAGAGTG ATCCAGTTGAGCAGGAAAACCTTTGACACAGAGTATCCAAAGACGAAACTCACGGACTGGGATTTTGTGG TCACCACAGACATATCTGAAATGGGGGCCAATTTCAGAGCTGGGAGAGTGATAGACCCCAGGAGATGCCT CAAGCCAGTTATCCTAACAGATGGGCCAGAGAGAGTTATTCTAGCAGGTCCAATCCCAGTAACTCCAGCA AGTGCCGCTCAGAGAAGAGGGCGAATAGGTAGGAATCCAGCACAGGAAGATGACCAATATGTTTTCTCCG GAGACCCACTAAAAAATGATGAAGATCATGCTCACTGGACAGAAGCAAAGATGCTGCTTGACAATATCTA CACCCCTGAAGGGATAATTCCAACACTGTTTGGTCCGGAAAGGGAAAAAACCCAAGCCATTGATGGAGAG TTTCGCCTCAGAGGGGAACAAAGGAAGACTTTTGTGGAATTAATGAAGAGAGGAGACCTTCCGGTGTGGC TGAGCTACAAGGTAGCTTCTGCCGGTATCTCTTACAAAGATCGAGAATGGTGCTTCACAGGAGAAAGGAA TAACCAAATTTTAGAAGAAAACATGGAGGTTGAAATTTGGACTAAAGAGGGAGAAAAGAAAAAGCTAAGG CCAAAATGGTTAGATGCACGTGTGTACGCTGATCCCATGGCTTTGAAGGATTTCAAGGAGTTTGCCAGTG GAAGAAAGAGCATAACTCTCGACATCCTAACAGAGATTGCCAGTTTGCCAACTTACCTTTCCTCTAAGGC CAAGCTGGCCCTTGACAACATAGTTATGCTCCACACAACAGAAAAAGGAGGGAGGGCCTACCAACACGCC CTGAACGAACTCCCGGAGTCACTGGAAACACTCATGCTTGTAGCTCTACTAGGTGCTATGACAGCCGGCA TCTTCCTGTTTTTCATGCAGGGGAAAGGAATAGGAAAATTGTCAATGGGTCTAATAGCCATAGCCGTGGC TAGTGGCTTGCTCTGGGTAGCAGAAATTCAGCCCCAGTGGATAGCAGCTTCAATCATACTGGAGTTCTTT CTTATGGTGCTGTTGATACCAGAACCAGAAAAACAAAGGACCCCACAAGACAATCAATTGATCTACGTCA TATTGACCATTCTCACCATCATCGGTCTTATAGCAGCCAATGAGATGGGGCTGATTGAAAAAACAAAAAC TGACTTTGGGTTTTACCAGGTAAAAACAGAAACCACTATTCTTGATGTGGATTTGAGACCAGCCTCAGCA TGGACACTCTATGCGGTAGCCACCACCATTCTGACTCCCATGCTGAGACACACCATAGAAAACACGTCTG CCAACCTATCTTTAGCAGCCATTGCCAACCAAGCAGCTGTCCTAATGGGACTTGGAAAAGGATGGCCGCT CCACAGAATGGACCTCGGTGTGCCGCTGTTAGCAATAGGATGTTATTCTCAAGTGAACCCAACAACCCTG ACAGCATCCTTAGTCATGCTTTTAGTCCATTATGCCATAATAGGTCCAGGATTGCAGGCAAAAGCCACAC GAGAGGCCCAGAAAAGGACAGCTGCTGGGATCATGAAGAACCCTACGGTGGACGGGATAACAGTAATAGA TCTAGAACCAATATCCTATGACCCAAAATTTGAAAAGCAATTAGGGCAAGTCATGCTACTAGTCCTGTGT GTTGGACAATTACTTTTGATGAGAACAACATGGGCTCTCTGCGAAGTCTTGACTTTGGCCACAGGACCAG CCATGACCTTGTGGGAGGGCAACCCGGGAAGGTTTTGGAACACGACCATAGCTGTATCCACAGCCAACAT TTTCAGAGGAAGCTACTTGGCAGGAGCTGGACTAGCTTTTTCGCTCATAAAGAATGCACAAACCCCTAGG AGGGGAACTGGGACCACAGGAGAGACACTGGGAGAGAAGTGGAAGAGACAGCTAAACTCATTAGACAGAA AAGAGTTTGAAGAGTACAAAAGAAGTGGAATACTAGAAGTGGATAGGACTGAAGCCAAGTCTGCCCTAAA AGATGGATCTAAAATCAAGCATGCGGTGTCCAGAGGGTCTAGTAAGATCAGATGGATTGTTGAAAGAGGG ATGGTAAAGCCAAAAGGGAAGGTCGTGGATCTCGGTTGCGGGAGGGGAGGATGGTCCTATTACATGGCGA CACTCAAGAACGTGACTGAAGTGAAAGGATATACAAAAGGAGGTCCAGGACATGAGGAACCAATCCCCAT GGCTACTTATGGCTGGAACTTGGTCAAACTCCATTCAGGGGTTGATGTGTTTTACAAACCCACTGAGCAG GTGGACACCTTGCTCTGTGACATTGGGGAGTCGTCCTCTAATCCGACAATAGAGGAAGGAAGAACATTGA GAGTCTTGAAGATGGTGGAGCCATGGCTCTCTTCAAAACCTGAGTTCTGCATCAAAGTCCTCAACCCCTA TATGCCAACAGTTATAGAAGAGCTGGAGAAACTCCAGAGAAGATATGGTGGAAGCCTCGTCAGATGCCCT CTATCCAGGAATTCTACCCATGAGATGTATTGGGTGTCAGGTGCGTCGGGAAACATCGTGAGTTCTGTGA ACACAATATCAAAGATGCTGTTGAACAGGTTCACAACAAGGCATAGGAAACCCACTTATGAGAAGGACGT GGATCTTGGGGCAGGAACGAGAAGTGTCTCCACTGAAACAGAAAAACCAGACATGACAGTTATTGGGAGA AGGCTTCAGAGATTGCAAGAAGAGCACAAAGAAACCTGGCACTATGACCAGGAAAACCCATACAGAACCT GGGCGTATCATGGAAGCTATGAAGCTCCTTCGACAGGCTCAGCATCCTCCATGGTGAATGGAATAGTGAA ACTGCTGACAAAACCCTGGGATGTGATTCCAATGGTGACCCAGTTGGCCATGACAGACACAACCCCTTTT GGGCAACAAAGAGTGTTCAAGGAGAAGGTGGATACCAGAACACCACAACCAAAACCCGGCACACGAATGA TTATGACCACGACAGCCAATTGGCTGTGGGCTCTCCTCGGGAAGAAGAAAAGTCCCAGATTGTGTACAAG GGAAGAGTTCATCTCAAAAGTTAGGTCAAATGCAGCCATAGGCGCAGTCTTTCAGGAAGAACAGGGATGG ACATCAGCCAGTGAAGCTGTGAATGACAGCCGGTTCTGGGAACTGGTTAACAAAGAAAGGGCTCTGCACC AGGAAGGAAAATGTGAATCGTGTGTCTATAACATGATGGGAAAACGTGAGAAAAAATTAGGAGAGTTTGG TAGGGCCAAGGGAAGCCGAGCAATCTGGTACATGTGGCTGGGGGCGCGGTTCCTGGAATTTGAAGCCCTG GGTTTCTTGAATGAAGATCACTGGTTTAGCAGAGAAAACTCATGGAGTGGAGTGGAAGGGGAAGGTCTGC ACAGATTGGGATATATCTTGGAGGATATAGACAAGCAGGATGGAGATCTAATATATGCTGACGACACAGC AGGCTGGGACACGAGAATCACTGAGGATGACCTTTTAAATGAAGAACTGATCACAGAACAGATGGCCCCC CACCACAAGACCCTAGCCAAAGCCATTTTCAAACTAACCTATCAAAACAAAGTGGTGAAAGTCCTCAGAC CCACACCGAAAGGAGCGGTGATGGACATCATATCCAGGAAAGACCAAAGAGGTAGTGGACAGGTTGGAAC ATATGGTTTAAACACATTCACTAACATGGAAGTTCAACTCATCCGCCAAATGGAAGCTGAAGGAGTCATC ACACAAGACGACATGCAGAACCCAAAAGGGTTGAAAGAAAGAGTTGAGAAATGGCTGACAGAGTGTGGCG TCGACAGGTTGAAGAGGATGGCAATCAGTGGAGATGACTGCGTGGTGAAACCCCTAGATGAGAGGTTCAG CGCTTCCCTCCTCTTCTTGAACGACATGGGAAAGGTGAGGAAAGACATCCCGCAGTGGGAACCATCCAAG GGATGGAAAAACTGGCAAGAGGTCCCTTTTTGCTCCCACCATTTTCATAAGATCTTTATGAAAGATGGCC GCTCACTAGTTGTTCCATGCAGAAACCAGGATGAACTGATAGGAAGAGCCAGAATCTCGCAGGGGGCTGG ATGGAGCCTAAGAGAAACAGCCTGTTTGGGCAAAGCTTACGCCCAAATGTGGTCGCTTATGTATTTCCAT AGAAGGGACCTGCGTTTAGCCTCCATGGCCATATGTTCAGCAGTTCCAACGGAATGGTTTCCAACAAGCA GGACAACATGGTCAATCCACGCTCATCACCAGTGGATGACCACTGAAGACATGCTCAAAGTGTGGAACAG GGTGTGGATAGAAGACAACCCCAATATGACTGACAAGACTCCAGTCCATTCGTGGGAAGACATACCTTAC CTAGGGAAAAGAGAGGATTTGTGGTGTGGATCCCTGATTGGACTCTCTTCCAGAGCCACCTGGGCGAAGA ACATTCACACGGCCATAACCCAGGTCAGGAATCTGATCGGAAAAGAGGAATACGTGGATTACATGCCAGT CATGAAAAGATACAGCGCTCCTTCCGAAAGTGAAGGAGTTCTGTAATTACTAATAACAAACACCAAAGAG ACCATTGAAGTCAGGCCACTTGTGCCACGGCTTGAGCAAACCGTGCTGCCTGTAGCTCCGCCAATAATGG GAGGCGTAAAATTCCCAGGGAGGCCATGCGCCACGGAAGCTGTACGCGTGGCATATTGGACTAGCGGTTA GAGGAGACCCCTCCCATCACTGACAAAACGCAGCAAAAAAGGGGGCCCGAAGCCAGGAGGAAGCTGTACT TCTGGTGGAAGGACTAGAGGTTAGAGGAGACCCCCCCAACACAAAAACAGCATATTGACGCTGGGAAAGA CCAGAGATCCTGCTGTCTCTGCAACATCAATCCAGGCACAGAGCGCCGCGAGATGGATTGGTGTTGTTGA TCCAACAGGTTCT
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