Details of Virus RNA

  Strain Information Strain Name
Enterovirus 71
Strain Family
Picornaviridae
RNA Binding Site
5'UTR
  Virus Information Virus Name
Enterovirus 71 (EV71)
Taxonomy ID 39054
GeneBank ID U22521

Full list of proteins interacting with the 5'UTR of this Strain

Protein Name Uniprot ID Host Species Pro Info Detection Method Infection Cell Cell ID Cell Originated Tissue Infection Time Interaction Score Fold Change
Heterogeneous nuclear ribonucleoprotein A1 P09651 Homo sapiens Pro Info Electrophoretic mobility shift assay (EMSA) HeLa Cells (Human cervical carcinoma cell) . Cervix 2 h . .

Virus RNA Sequence Information

>U22521.1 Human enterovirus 71 polyprotein gene, complete cds TTAAAACAGCTGTGGGTTGTCACCCACCCACAGGGTCCACTGGGCGCTAGTACACTGGTATCTCGGTACC TTTGTACGCCTGTTTTATACCCCCTCCCTGATTTGCAACTTAGAAGCAACGCAAACCAGATCAATAGTAG GTGTGACATACCAGTCGCATCTTGATCAAGCACTTCTGTATCCCCGGACCGAGTATCAATAGACTGTGCA CACGGTTGAAGGAGAAAACGTCCGTTACCCGGCTAACTACTTCGAGAAGCCTAGTAACGCCATTGAAGTT GCAGAGTGTTTCGCTCAGCACTCCCCCCGTGTAGATCAGGTCGATGAGTCACCGCATTCCCCACGGGCGA CCGTGGCGGTGGCTGCGTTGGCGGCCTGCCTATGGGGTAACCCATAGGACGCTCTAATACGGACATGGCG TGAAGAGTCTATTGAGCTAGTTAGTAGTCCTCCGGCCCCTGAATGCGGCTAATCCTAACTGCGGAGCACA TACCCTTAATCCAAAGGGCAGTGTGTCGTAACGGGCAACTCTGCAGCGGAACCGACTACTTTGGGTGTCC GTGTTTCTTTTTATTCTTGTATTGGCTGCTTATGGTGACAATTAAAGAATTGTTACCATATAGCTATTGG ATTGGCCATCCAGTGTCAAACAGAGCTATTGTATATCTCTTTGTTGGATTCACACCTCTCACTCTTGAAA CGTTACACACCCTCAATTACATTATACTGCTGAACACGAAGCGATGGGCTCCCAGGTCTCCACACAGCGA TCCGGCTCGCATGAGAATTCCAACTCAGCCACGGAAGGCTCCACTATAAATTACACAACCATTAATTACT ACAAAGACTCGTATGCTGCCACTGCTGGAAAGCAAAGTCTCAAACAAGATCCTGACAAGTTTGCGAACCC TGTGAAGGACATCTTTACTGAAATGGCAGCGCCCTTAAAGTCTCCCTCTGCTGAAGCATGTGGCTATAGC GACCGAGTGGCACAGCTTACCATTGGAAATTCCACCATTACTACACAAGAAGCAGCAAACATAATAGTTG GGTATGGTGAGTGGCCTTCATACTGCTCTGATAATGATGCAACAGCGGTAGACAAACCTACACGGCCTGA TGTCTCAGTAAATAGATTTTACACGCTAGACACTAAGCTATGGGAGAAATCATCCAAGGGGTGGTACTGG AAGTTCCCAGATGTACTGACTGAAACCGGAGTTTTTGGTCCAAATGCACAATTTCACTACTTATACCGTT CAGGGTTCTGCATCCACGTTCAATGTAACGCTAGCAAATTTCACCAAGGGGCGCTACTCGTTGCGGTATT GCCCGAGTATGTCATTGGAACAGTGGCAGGCGGCACAGGCACAGAGAACAGTCACCCTCCTTATAAACAA ACCCAACCCGGCGCTGATGGATTTGAATTACAACATCCATATGTTCTTGATGCTGGAATTCCAATATCTC AGTTGACAGTGTGCCCTCACCAGTGGATCAATTTACGAACCAACAATTGTGCCACCATAATAGTGCCATA CATGAACACACTACCTTTTGATTCCGCATTGAACCACTGTAATTTCGGACTATTGGTGGTGCCTATCAGC CCGCTGGATTTCGACCAAGGGGCGACACCGGTAATTCCTATCACTATCACGTTGGCTCCGATGTGTTCTG AGTTTGCGGGTCTCAGGCAGGCAGTTACGCAGGGTTTTCCCACTGAATTGAAACCTGGCACTAATCAGTT CTTAACCACGGATGATGGTGTGTCAGCACCTATATTGCCAAATTTCCACCCCACCCCGTGCATTCACATA CCTGGCGAGGTTAGAAACTTACTAGAACTGTGCCAGGTAGAAACCATTTTAGAAGTCAACAATGTGCCCA CCAACGCAACCAGTTTGATGGAAAGGCTACGGTTTCCAGTGTCAGCCCAAGCAGGGAAAGGTGAGTTGTG TGCAGTGTTCAGGGCCGACCCTGGGAGGGATGGTCCTTGGCAATCCACCATGCTAGGCCAGTTGTGTGGA TATTACACCCAATGGTCAGGGTCTTTGGAAGTCACTTTTATGTTCACCGGATCCTTTATGGCAACTGGTA AAATGCTTATAGCTTACACACCCCCAGGGGGCCCTTTGCCTAAAGATAGAGCCACAGCTATGCTGGGGAC GCACGTCATCTGGGACTTTGGCTTGCAATCGTCCGTCACCCTCGTCATACCATGGATCAGTAACACTCAC TATAGGGCGCATGCTCGAGATGGGGTGTTTGATTACTACACCACAGGTTTGGTTAGTATATGGTACCAAA CAAATTATGTAGTCCCTATTGGAGCACCTAATACTGCCTATATAATAGCGTTGGCAGCAGCCCAAAAGAA TTTCACTATGAAATTGTGCAAGGACACCAGTGACATTTTGGAAACGGCCACTATTCAAGGGGACAGAGTG GCAGATGTGATTGAGAGCTCTATAGGAGATAGTGTGAGTAAGGCCCTCACCCCAGCTTTACCTGCACCCA CAGGCCCAGACACCCAAGTGAGCAGTCATCGCTTAGACACTGGAAAAGTACCAGCACTTCAAGCCGCCGA AATCGGAGCTTCGTCGAATGCTAGTGATGAGAGTATGATTGAGACTCGGTGTGTTCTTAACTCACATAGC ACAGCTGAAACCACCCTTGATAGTTTCTTCAGCAGAGCAGGCTTAGTTGGGGAGATAGATCTTCCTCTAA AGGGCACCACCAATCCGAACGGGTATGCCAACTGGGACATAGACATAACCGGTTATGCGCAGATGCGCAG AAAAGTGGAACTATTCACCTATATGCGCTTTGACGCAGAGTTCACTTTTGTCGCGTGCACACCTACCGGA AGGGTCGTTCCACAGCTGCTTCAATACATGTTTGTTCCACCCGGGGCCCCCAAACCAGACTCCAGAGACT CTTTGGCTTGGCCAACGGCCACGAACCCCTCAGTTTTTGTCAAATCATCCGACCCACCAGCACAAGTCTC AGTGCCATTTATGTCACCTGCAAGCGCATACCAATGGTTTTATGACGGATACCCTACATTTGGAGAGCAC AAGCAAGAGAAGGATCTCGAGTATGGGGCATGCCCGAATAACATGATGGGCACATTCTCAGTGCGGACTG TGGGATCGTCAAAGTCAGAATATTCCTTAGTCATCAGAATATACATGAGAATGAAGCACGTCAGAGCGTG GATACCTCGGCCGATGCGCAATCAGAACTATTTGTTCAAATCCAACCCAAACTATGCTGGTGATTCCATT AAACCAACTGGTACCAGCCGAACGGCAATCACTACGCTCGGGAAATTCGGTCAGCAGTCTGGGGCTATTT ATGTGGGCAACTTTAGGGTAGTAAACAGACACCTAGCCACCCATACTGACTGGGCCAACTTGGTGTGGGA AGACAGCTCTAGAGACCTCCTAGTTTCTTCAACTACCGCTCAAGGGTGTGACACCATTGCTCGATGTAAC TGCCAAACCGGAGTGTATTACTGTAACTCTCGCAGAAAACACTATCCAGTCAGTTTTTCGAAACCTAGTT TGGTGTTTGTAGAAGCTAGTGAGTATTATCCAGCTAGATATCAGTCCCATCTTATGCTTGCTGAGGGCCA TTCAGAACCTGGTGATTGTGGCGGTATTCTTAGATGCCAACACGGTGTGGTGGGAATTGTCTCCACTGGC GGAAGTGGCCTTGTGGGATTTGCTGACGTTAGAGATCTTCTGTGGCTAGATGAGGAAGCGATGGAGCAGG GGGTATCTGATTACATCAAAGGTCTCGGTCGAGCCTTCGGCACAGGTTTCACTGACGCAGTGTCTAGGGA AGTGGAAGCGTTGAAGAACCACTTAATCGGCTCCGAAGGGGCTGTTGAGAAGATCTTGAAGAACTTGGTG AAGCTAATTTCAGCCTTAGTTATAGTCATCAGAAGTGATTATGATATGGTCACCCTCACAGCCACACTAG CTCTGATCGGGTGCCACGGGAGTCCTTGGGCGTGGATCAAATCAAAGACAGCTTCCATACTGGGCATTCC CATGGCACAAAAACAGAGTGCCTCATGGCTAAAGAAGTTCAATGACATGGCAAATGCTGCAAAAGGGCTT GAGTGGATTTTCAACAAGATCAGTAAGTTCATTGACTGGCTTAAAGAGAAGATCATTCCAGCTGCCAAAG AGAAAGTTGAGTTTTTGAACAACCTAAAACAGCTCCCCTTGTTGGAGAACCAAGTCTCCAATCTTGAACA GTCTGCTGCCTCACAAGAAGACTTAGAAGCTATGTTTGGTAATGTGATATATCTGGCTCACTTTTGCCGC AAATTCCAACCACTCTACGCAACTGAGGCCAAGAGAGTCTACGCTTTAGAGAAAAGGATGAATAACTACA TGCAGTTCAAGAGCAAACACCGTATTGAACCTGTATGCTTGATCATCAGAGGTTCCCCCGGAACGGGCAA ATCGCTCGCCACAGGCATTATAGCTAGAGCCATTGCTGACAAGTATCGCTCTAGTGTATACTCACTCCCC CCAGACCCAGATCACTTTGATGGGTATAAGCAACAGGTGGTCGCGGTCATGGATGATCTCTGCCAGAACC CGGACGGAAAAGACATGTCCCTATTTTGTCAAATGGTTTCTACAGTAGATTTTGTACCACCCATGGCATC ACTAGAGGAGAAAGGAGTGTCCTTCACCTCTAAGTTTGTCATTGCATCGACCAATGCTAGTAACATCATA GTCCCCACAGTTTCAGATTCAGATGCAATTCGCAGGCGATTCTATATGGACTGCGATATAGAAGTGACAG ATTCTTACAAGACAGACCTCGGTCGGCTGGACGCAGGTAGAGCTGCCAAGCTTTGTACAGAAAATAACAC TGCTAATTTTAAGAGATGCAGCCCACTGGTGTGTGGTAAGGCTATTCAGCTGAGAGACAGGAAGTCCAAA GTGAGATATAGCGTCGACACCGTGGTATCGGAACTGATCAGAGAGTACAACAATAGATCTGCTATTGGGA ATACTATAGAAGCACTCTTTCAAGGACCCCCTAAATTCAGGCCTATAAGAATTAGTCTCGAAGAAAAGCC AGCCCCAGATGCCATTAGCGATCTCCTCGCTAGTGTAGATAGCGAGGAGGTGCGTCAGTACTGCAGGGAA CAAGGCTGGATCATCCCTGAAACTCCCACCAATGTTGAGCGTCACCTCAATAGAGCAGTATTGGTAATGC AGTCCATCGCCACTGTGGTTGCAGTTGTGTCTCTTGTTTATGTCATTTATAAGCTGTTTGCCGGGTTCCA GGGTGCTTACTCTGGAGCGCCCAAGCCCATTCTCAAGAAGCCCGTGTTAAGAACAGCCACGGTCCAAGGG CCCAGCTTAGACTTCGCCTTGTCTCTTTTGAGGCGCAACATTAGACAAGCGCAAACTGACCAAGGACACT TCACCATGCTAGGAGTGCGAGATCGCCTAGCCATCCTGCCGCGCCACTCGCAACCAGGGAAGACCATCTG GGTAGAGCATAAATTAATCAATGTACTAGATGCAGTTGAGTTGGTGGATGAGCAAGGTGTAAACTTGGAA CTCACACTGGTAACTTTGGACACCAATGAAAAATTTAGGGATATCACCAAGTGTATCCCAGAAGTGATCA CCGGGGCGAGTGACGCAACTCTAGTCATCAACACTGAGCACATTCCCTCAATGTTTGTGCCGGTGGGTGA CGTTGTGCAGTACGGTTTCTTGAACCTTAGTGGTAAACCCACACACAGAACCATGATGTATAACTTCCCC ACGAAGCCAGGACAGTGTGGGGGGGTGGTTACCTCAGTTGGTAAGATCATTGGAATCCACATTGGCGGGA ATGGACGCCAGGCCTTTTGCGCTGGCCTAAAGAGGAGTTATTTTGCCAGCGAGCAAGGAGAGATCCAGTG GATGAAGCCTAACAGAGAAACCGGGAGGTTGAATATTAATGGTCCAACCCGAACTAAGCTGGAACCCAGT GTATTCCATGATGTGTTCGAGGGCAACAAGGAACCAGCGGTCCTGACTAGTAAGGACCCCAGACTTGAGG TTGATTTTGAGCAAGCTTTGTTCTCCAAGTATGTGGGTAACACCCTGCATGAACCTGATGAGTACGTGAC ACAGGCTGCTCTCCACTACGCAAATCAGCTGAAGCAACTGGACATCAACACCAGCAAGATGAGCATGGAA GAAGCGTGCTATGGCACAGAATATTTAGAAGCTATAGACTTGCACACCAGTGCTGGATACCCTTATAGTG CTTTGGGCATCAAGAAAAGAGACATCCTCGACCCAGTTACCAGAGACACCTCCAGGATGAAGTTATATAT GGATAAGTATGGGTTGGACTTGCCTAATTCCACTTATGTAAAGGATGAGCTTAGTTCTCTAGATAAGATC AGAAAAGGGGAGTCTCGCCTGATTGAGGCTAGCAGCTTAAATGATCCTGTCTACCCTAGATTGACTTTTG GACACCTTTATGAAGTGTTTCACGCCAACCCAGGGACTGTAACAGGATCTGCAGTTGGGTGCAACCCTGA TGTATTTTGGAGCAAGTTACCAATTTTGTTACCGGGTTCACTCTTTGCATTTGACTACTCAGGATATGAT GCAAGCCTTAGTCCTGTGTGGTTCAGAGCTCTAGAGTTGGTTCTGAGAGAGATCGGTTACTCGGAGGAGG CTGTGTCACTCATAGAAGGGATCAATCACACCCACCACGTGTACCGAAACAAGACATATTGTGTACTTGG TGGAATGCCCTCAGGCTGCTCCGGTACTTCCATTTTCAATTCCATGATTAACAACATAATCATCAGAACC CTCCTGATTAAAACATTCAAAGGTATAGACTTAGATGAGCTGAAAATGGTAGCTTATGGAGATGACGTGT TGGCCAGCTACCCGTTTCCTATTGATTGCTTGGAATGGGGTAAAACAGGCAAAGAATATGGGCTGACTAT GACTCCTGCTGATAAATCACCTTGTTTCAATGAGGTTACCTGGGAGAATGCAACCTTCTTAAAACGGGGT TTTCTACCGGACCATCAGTTCCCTTTTCTGATCCATCCCACTATGCCCATGAGGGAAATCCATGAGTCCA TCCGCTGGACCAAGGACGCGCGCAATACTCAAGATCATGTGCGCTCCCTTTGTCTCCTGGCATGGCATAA TGGAAAAGAGGAGTATGAGAAATTTGTGAGTACAATTAGATCAGTCCCCATTGGAAGGGCTTTAGCAATT CCAAATTTGGAGAACTTGAGAAGAAATTGGCTCGAGTTATTTTAAACTTACAGCTCAATGCTGAACCCCA CCAGAAATCTGGTCGTGTCAATGACTGGTGGGGGTAAATTTGTTATAACCAGAATAGC
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