Details of Virus RNA

  Strain Information Strain Name
Encephalomyocarditis virus
Strain Family
Cardiovirus a
RNA Binding Site
5'UTR - IRES
  Virus Information Virus Name
Encephalomyocarditis virus (EMCV)
Taxonomy ID 12104

Full list of proteins interacting with the 5'UTR - IRES of this Strain

Protein Name Uniprot ID Host Species Pro Info Detection Method Infection Cell Cell ID Cell Originated Tissue Infection Time Interaction Score Fold Change
Polypyrimidine tract-binding protein 1 P26599 Homo sapiens Pro Info . B95a Cells (Marmoset lymphoblastoid cell line) . . . . .

Virus RNA Sequence Information

>NC_001479.1 Encephalomyocarditis virus, complete genome TTGAAAGCCGGGGGTGGGAGATCCGGATTGCCAGTCTGCTCGATATCGCAGGCTGGGTCCGTGACTACCC ACTCCCCCTTTCAACGTGAAGGCTACGATAGTGCCAGGGCGGGTACTGCCGTAAGTGCCACCCCAAAATA ACAACAGACCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCTCTCCCTCCCCCCCCCC TAACGTTACTGGCCGAAGCCGCTTGGAATAAGGCCGGTGTGCGTTTGTCTATATGTTATTTTCCACCATA TTGCCGTCTTTTGGCAATGTGAGGGCCCGGAAACCTGGCCCTGTCTTCTTGACGAGCATTCCTAGGGGTC TTTCCCCTCTCGCCAAAGGAATGCAAGGTCTGTTGAATGTCGTGAAGGAAGCAGTTCCTCTGGAAGCTTC TTGAAGACAAACAACGTCTGTAGCGACCCTTTGCAGGCAGCGGAACCCCCCACCTGGCGACAGGTGCCTC TGCGGCCAAAAGCCACGTGTATAAGATACACCTGCAAAGGCGGCACAACCCCAGTGCCACGTTGTGAGTT GGATAGTTGTGGAAAGAGTCAAATGGCTCTCCTCAAGCGTATTCAACAAGGGGCTGAAGGATGCCCAGAA GGTACCCCATTGTATGGGATCTGATCTGGGGCCTCGGTGCACATGCTTTACATGTGTTTAGTCGAGGTTA AAAAACGTCTAGGCCCCCCGAACCACGGGGACGTGGTTTTCCTTTGAAAAACACGATGATAATATGGCCA CAACCATGGAACAAGAGACTTGCGCGCACTCTCTCACTTTTGAGGAATGCCCAAAATGCTCTGCTCTACA ATACCGTAATGGATTTTACCTGCTAAAGTATGATGAAGAATGGTACCCAGAGGAGTTATTGACTGATGGA GAGGATGATGTCTTTGATCCCGAATTAGACATGGAAGTCGTTTTCGAGTTACAGGGCAATTCCACCTCCT CAGACAAGAATAACTCCTCCTCGGAAGGCAATGAAGGTGTGATCATCAATAACTTTTACTCCAACCAATA TCAAAACTCCATTGACCTCTCTGCTAATGCAGCCGGGTCTGACCCACCCAGAACCTACGGTCAATTTTCG AATCTCTTTTCGGGCGCAGTGAATGCCTTTTCTAATATGCTTCCATTGCTAGCTGATCAAAATACAGAAG AAATGGAGAATCTGTCTGATCGAGTGTCTCAAGACACTGCCGGCAATACGGTCACAAACACCCAGTCAAC AGTGGGCCGTCTTGTCGGTTATGGTACCGTTCATGATGGAGAGCATCCGGCATCATGTGCTGACACTGCT TCAGAAAAGATCCTGGCGGTGGAAAGGTACTACACCTTCAAGGTTAATGATTGGACATCAACACAAAAGC CCTTTGAGTACATCCGCATTCCCCTTCCTCACGTCCTGTCCGGTGAAGATGGTGGTGTCTTTGGTGCGGC CCTCCGCCGGCACTACCTGGTGAAAACTGGATGGCGGGTGCAAGTTCAGTGCAACGCCTCTCAATTCCAC GCTGGAGGTTTGCTGGTGTTCATGGCACCAGAGTATCCAACCTTAGATGCTTTTGCCATGGACAACCGTT GGTCCAAGGATAACCTGCCTAATGGAACCAGAACTCAGACAAACAAAAAGGGACCATTTGCCATGGACCA TCAGAACTTCTGGCAGTGGACCTTGTATCCCCATCAATTCCTGAATCTGAGAACTAACACCACAGTGGAT CTTGAGGTGCCATATGTAAACATAGCCCCCACTTCCTCCTGGACACAACATGCTTCCTGGACTTTGGTGA TTGCAGTGGTTGCTCCCCTGACATACTCAACCGGGGCTTCTACCAGTTTGGATATCACCGCTTCTATTCA GCCAGTAAGGCCTGTCTTTAATGGCCTCCGGCATGAGACACTTTCTAGACAGTCGCCCATTCCGGTCACA ATTAGAGAACATGCTGGTACCTGGTATTCTACTCTGCCAGACAGCACAGTGCCTATTTATGGCAAGACTC CTGTTGCTCCATCCAATTACATGGTAGGCGAATACAAGGACTTCCTGGAGATAGCTCAGATTCCAACCTT TATTGGGAATAAGATCCCTAATGCTGTCCCCTACATTGAGGCATCCAACACAGCCGTCAAGACCCAACCG CTGGCCACCTATCAAGTGACCTTGTCCTGCTCCTGTCTGGCCAATACATTCTTGGCCGCTTTGTCTAGAA ACTTTGCTCAGTACCGGGGATCATTGGTTTATACCTTTGTGTTCACTGGGACCGCGATGATGAAGGGCAA GTTCCTCATTGCCTACACCCCACCTGGAGCGGGCAAGCCCACTAGTCGAGACCAAGCCATGCAGGCGACT TATGCGATTTGGGATTTGGGGCTAAATTCTTCTTACTCCTTCACTGTGCCTTTTATTTCTCCCACTCACT TCCGCATGGTAGGTACTGACCAAGTCAACATCACTAATGCGGATGGCTGGGTTACCGTGTGGCAGCTCAC TCCCCTCACTTACCCACCAGGATGCCCGACCTCTGCTAAGATACTAACAATGGTGAGCGCAGGGAAGGAT TTCTCACTCAAGATGCCTATCTCACCTGCCCCCTGGAGCCCTCAGGGAGTAGAAAACGCTGAAAAAGGGG TCACTGAAAACACAAACGCAACTGCTGACTTTGTGGCTCAACCAGTTTACTTGCCTGAGAACCAAACGAA GGTGGCTTTCTTCTATAATAGGTCCAGTCCCATTGGTGCCTTCACCGTGAAGTCCGGCAGTCTAGAATCT GGTTTTGCCCCGTTCTCTAATGGGACTTGCCCGAACTCAGTGATACTGACCCCTGGGCCCCAATTTGACC CCGCCTATGACCAACTCAGGCCACAGCGTCTGACAGAAATTTGGGGCAATGGAAATGAGGAGACCTCAAA AGTCTTTCCGCTTAAATCCAAACAGGATTATTCCTTCTGCCTCTTCTCCCCCTTTGTGTATTATAAATGT GATTTAGAAGTGACTCTTAGTCCTCACACTTCAGGCAACCATGGGCTGTTGGTGAGGTGGTGTCCCACTG GTACACCAACCAAGCCCACTACCCAGGTTCTCCATGAAGTAAGTTCCCTCTCAGAAGGCAGAACCCCCCA GGTTTATAGTGCCGGACCTGGCATTTCAAATCAGATTTCCTTTGTAGTTCCTTACAATTCTCCACTTTCA GTCCTATCAGCTGTCTGGTATAATGGACACAAGAGATTTGACAACACTGGGAGCTTGGGCATTGCCCCTA ATTCTGATTTCGGCACTCTGTTCTTTGCTGGCACAAAGCCTGACATTAAATTCACAGTCTACTTGAGATA CAAGAATAAGAGAGTTTTTTGCCCACGTCCGACTGTCTTTTTCCCCTGGCCCACTTCCGGAGACAAGATT GATATGACCCCGAGAGCTGGAGTCTTGATGCTAGAGAGTCCAAATGCCCTAGACATTTCAAGAACATACC CCACGTTACATGTTCTCATTCAATTCAACCATAGAGGTTTGGAGGTTAGATTGTTTAGACATGGACACTT TTGGGCTGAAACACGTGCGGACGTGATTCTGAGATCAAAGACCAAACAGGTCTCTTTCCTGAGCAACGGG AACTACCCGTCAATGGACTCTAGAGCTCCCTGGAATCCTTGGAAGAATACCTACCAGGCGGTTCTAAGAG CAGAACCATGTAGAGTGACCATGGATATATATTATAAGAGAGTCAGGCCTTTTAGACTGCCCCTGGTTCA GAAGGAATGGCCCGTGCGAGAGGAGAACGTTTTCGGTTTGTACCGGATCTTCAATGCCCACTACGCTGGT TACTTTGCGGACCTACTGATTCATGACATTGAGACAAATCCAGGGCCCTTCATGTTTAGACCAAGGAAAC AGGTTTTCCAGACCCAAGGAGCGGCAGTGTCATCAATGGCTCAAACCCTACTGCCGAACGACCTTGCCAG CAAAGCTATGGGATCAGCTTTTACGGCTTTGCTCGATGCCAACGAGGACGCCCAAAAAGCAATGAAGATT ATAAAGACATTAAGTTCTCTATCGGATGCATGGGAAAATGTAAAAGAAACACTAAACAACCCAGAGTTCT GGAAGCAGCTCTTGAGCAGATGTGTGCAGCTGATTGCAGGGATGACAATAGCAGTGATGCATCCGGACCC TTTGACTCTGCTCTGCTTAGGAACATTGACGGCCGCCGAGATTACAAGCCAGACAAGTCTGTGCGAAGAA ATAGCAGCTAAGTTCAAGACAATTTTCATCACTCCTCCACCACGGTTTCCCACAATCTCTCTTTTCCAAC AACAATCCCCCTTGAAACAGGTAAATGATATTTTCTCCCTAGCCAAGAACCTGGACTGGGCCGTCAAGAC TGTGGAAAAGGTGGTTGATTGGTTTGGGACATGGATAGTACAGGAGGAAAAGGAACAGACCCTAGATCAG CTCTTGCAGCGTTTCCCCGAACATGCGAAGCGCATTTCTGATCTCCGGAATGGAATGGCCGCCTATGTAG AGTGCAAGGAGAGTTTTGATTTCTTTGAAAAGCTGTACAATCAGGCAGTGAAAGAGAAGAGAACGGGTAT CGCCGCCGTCTGTGAAAAATTCAGACAGAAGCATGACCACGCCACCGCTCGGTGTGAGCCAGTCGTGATT GTGCTCCGCGGAGACGCGGGGCAAGGGAAATCTTTATCAAGTCAGGTTATTGCCCAGGCCGTCTCCAAGA CCATTTTCGGCCGGCAATCTGTGTATTCCCTTCCCCCCGATTCGGATTTCTTTGATGGCTATGAAAATCA GTTTGCAGCAATAATGGATGATCTAGGGCAAAATCCTGATGGCTCTGATTTCACTACGTTCTGTCAGATG GTTTCGACTACCAATTTTCTCCCCAATATGGCTAGTCTAGAGAGAAAGGGCACCCCCTTTACATCTCAGC TTGTGGTGGCAACTACCAATCTGCCTGAGTTTAGACCTGTCACAATAGCCCATTACCCTGCTGTTGAGAG AAGGATAACTTTCGACTATTCAGTGTCTGCTGGTCCAGTCTGCTCCAAAACAGAGGCCGGGTATAAGGTT TTGGATGTTGAAAGAGCCTTTAGGCCTACCGGTGAGGCTCCTCTTCCATGCTTCCAGAATAACTGCCTTT TCCTTGAGAAAGCTGGGCTCCAGTTCAGAGATAACCGAACTAAAGAGATCATTTCCCTGGTAGATGTGAT TGAGAGAGCCGTGGCTAGGATTGAAAGGAAGAAGAAAGTTCTCACAACCGTGCAGACCCTTGTGGCACAA GGTCCAGTAGACGAGGTCAGTTTCCATTCCGTAGTCCAGCAGCTTAAAGCAAGACAGCAAGCGACAGATG AACAGCTTGAGGAATTGCAAGAGGCTTTCGCGAAAGTACAGGAGCGTAACTCTGTGTTTTCTGATTGGTT GAAGATTTCTGCAATGTTGTGTGCTGCGACTCTGGCACTTTCCCAAGTTGTCAAGATGGCCAAGGCGGTG AAGCAGATGGTCAAGCCTGATCTGGTTCGTGTGCAATTGGATGAGCAGGAGCAGGGACCTTACAATGAGA CAGCGAGAGTTAAACCAAAAACACTGCAGTTGTTGGACATTCAGGGACCAAACCCTGTGATGGACTTTGA AAAATATGTAGCCAAACATGTAACCGCCCCCATTGGTTTTGTCTACCCCACTGGGGTGAGCACCCAGACT TGCCTCCTTGTGAGAGGCCGCACCTTGGTAGTAAATAGACACATGGCCGAGTCTGACTGGACTTCCATAG TAGTGCGTGGAGTCACACACGCCCGCTCTACTGTTAAAATTTTGGCCATAGCTAAAGCAGGCAAAGAGAC TGACGTATCTTTCATCCGCCTCTCTTCTGGTCCTCTATTCAGAGACAATACATCCAAATTTGTCAAGGCT GGTGATGTACTTCCTACTGGTGCCGCTCCAGTCACGGGGATAATGAACACGGACATACCCATGATGTACA CAGGAACCTTCCTGAAAGCTGGTGTGTCAGTCCCAGTGGAAACCGGCCAGACCTTTAATCACTGTATTCA TTACAAGGCTAACACACGAAAGGGCTGGTGTGGATCAGCCCTACTGGCAGATCTTGGAGGAAGCAAGAAA ATCCTTGGCATCCATTCTGCTGGCTCTATGGGAATAGCCGCCGCCTCGATTGTGTCACAGGAGATGATTC GGGCGGTAGTGAATGCCTTTGAGCCACAGGGTGCTCTCGAGAGATTGCCAGATGGGCCCCGTATTCACGT ACCACGTAAAACAGCACTACGCCCCACCGTTGCCCGTCAAGTCTTCCAACCAGCATATGCCCCGGCTGTT CTATCGAAATTTGACCCTAGAACAGAGGCTGATGTAGATGAAGTGGCTTTCTCCAAACATACCTCCAACC AGGAAAGCCTCCCACCAGTGTTTAGAATGGTAGCCAAAGAGTATGCCAATAGAGTTTTCACCTTGCTGGG AAAAGACAATGGCCGTCTGACTGTAAAGCAGGCTTTGGAAGGACTGGAGGGGATGGACCCCATGGACAGG AACACCTCCCCGGGGCTTCCATATACTGCGCTAGGAATGCGCAGAACAGATGTCGTAGATTGGGAATCAG CCACCCTGATCCCGTTTGCGGCAGAAAGATTAAGAAAAATGAATGAAGGAGACTTTTCCGAAGTTGTCTA TCAAACATTCCTCAAGGATGAGCTTAGACCGATAGAGAAGGTTCAAGCCGCCAAGACACGGATTGTAGAT GTTCCACCATTTGAGCATTGCATTCTGGGTAGACAATTGTTGGGAAAGTTTGCATCAAAGTTCCAGACCC AACCGGGTCTGGAACTAGGATCAGCCATTGGATGTGACCCAGATGTACACTGGACTGCCTTCGGTGTCGC CATGCAAGGTTTTGAGCGTGTCTACGATGTGGACTACTCCAACTTTGATTCGACCCATTCGGTGGCAATG TTCCGCTTATTGGCTGAGGAATTTTTCACTCCAGAGAATGGTTTTGACCCCCTGACTAGAGAATATCTTG AGTCATTAGCCATTTCAACCCATGCGTTTGAGGAGAAGCGCTTTCTGATAACCGGTGGTCTCCCATCAGG TTGTGCAGCGACCTCAATGCTAAACACTATAATGAATAATATAATAATTAGGGCGGGTTTGTATCTCACG TATAAAAATTTTGAATTTGATGATGTGAAGGTGTTGTCGTACGGAGATGATCTCCTTGTGGCCACAAATT ACCAATTGGATTTTGATAAGGTGAGAGCAAGCCTCGCAAAGACAGGATATAAGATAACTCCCGCTAACAC AACTTCTACCTTTCCTCTTAATTCGACGCTTGAAGACGTTGTCTTCTTAAAAAGAAAGTTTAAGAAAGAG GGCCCTCTGTATCGGCCTGTCATGAACAGAGAGGCGTTGGAAGCAATGTTGTCATACTATCGTCCAGGGA CTCTATCTGAGAAACTCACTTCGATCACTATGCTTGCCGTTCATTCTGGCAAGCAGGAATATGATCGGCT CTTTGCCCCATTCCGTGAGGTAGGGGTTGTCGTGCCATCATTCGAGAGTGTGGAGTACAGATGGAGGAGT CTGTTCTGGTAGTAGTGTAGTCACTGGCACAACGCGTTACCCGGTAAGCCAATCGGGTATACACGGTCGT CATACTGCAGACAGGGTTCTTCTACTTTGCAAGATAGTCTAGAGTAGTAAAATAAATAGATAGAG
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