Details of Virus RNA

  Strain Information Strain Name
Foot-and-mouth disease virus
Strain Family
Picornaviridae
RNA Binding Site
5'UTR - IRES
  Virus Information Virus Name
Foot-and-mouth disease virus (FMDV)
Taxonomy ID 12110

Full list of proteins interacting with the 5'UTR - IRES of this Strain

Protein Name Uniprot ID Host Species Pro Info Detection Method Infection Cell Cell ID Cell Originated Tissue Infection Time Interaction Score Fold Change
Polypyrimidine tract-binding protein 1 P26599 Homo sapiens Pro Info . B95a Cells (Marmoset lymphoblastoid cell line) . . . . .

Virus RNA Sequence Information

>NC_039210.1 Foot-and-mouth disease virus O isolate o6pirbright iso58, complete genome TTGAAAGGGGGCGCTAGGGTTTCACCCCTAGCACGCCAACGACAGTCCCTGCGTTGCACTCCACACTTAC GTTCGCGTGCACGCGGGACCCGATGGACTTTCGTTCACCCACCTACGGTTGGACTCACGGCACCGCGTGG CCATTTTAGCTGGACCGTGTGGACGAACACCGCTTGCGCTTCTCGCGTGACCGGCTAGTACTCTGACCAC TCTCCGCCTACTTGGTCGCTGCGCTGTCTTGGGCACTCCTATTGGGGTCGTTCGACGCTCCACGGGCTCC CCCGTGCGGCGGGCTACGGTGATGGGGCCGTTTCGCGCGGGCTGATCGCCTGGTCTGCTTCGGCTGTCAC CCGAAGCCCGCCTTTCACCCCCCCCCCCCTAAGTTTTACCGTCGTTTCCGACGTAAAGGGGAAGTAACCA CAAGCTTGACACCGCCTGTCCCGGCGTTAAAGGGAAGTAACCACAAGCTTACAACCGCCTACCCCGGTGT TAATGGGATGTAACCACAAGATACACCTTCACCCGGAAGTAAAACGGCAAATTCACACAGTTTTGCCCGT TTTTCATGAGAAACGGGACGTCTGCGCACGAAACGCGCCGTCGCTTGAGGAGGACTTGTACAAACACGAT CTAAACAGGTTTCCCCAACTGACATACACCGTGCAATTTGAAACTCCGCCTGGTCTTTCCAGGTCTAGAG GGGTAACACTTTGTACTGTGCTTGACTCCACGCTCGGTCCACTGGCGAGTGTTAGTAACAGCACTGGTGC TTCGTAGCGGAGCATGGTGGCCGTGGGAACTCCTCCTTGGTAACAAGGACCCACGGGGCCGAAAGCCACG TCCTGACGGACCCACCATGTGTGCAACCCCAGCACGGCAACTTTTCTGTGAAACTCACTCTAAGGTGACA CTGATACTGGTATTCAAGTACTGGTGACAGGCTAAGGATGCCCTTCAGGTACCCCGAGGTAACACGCGAC ACTCGGGATCTGAGAAGGGGACTGGGGCTTCTGTAAAAGCGCCCAGTTTAAAAAGCTTCTATGCCTGGAT AGGTGACCGGAGGCCGGCGCCTTTCCATTATAACTACTGACTTTATGAACACAACTAACTGTTTTATCGC TTTGGTGTACGCTATCAGAGAGATCAGAACGCTTTTCCTTTCACGAGCTACAGGAAAGATGGAATTCACG CTGTACAACGGTGAAAAGAAGACCTTTTACTCCAGGCCCAACAACCACGACAACTGTTGGTTGAACACCA TCCTTCAGTTGTTCAGGTACGTCGATGAGCCTTTCTTCGACTGGGTCTACAACTCACCCCAGAACCTCAC GCTTGAAGCCATCAAACAGCTGGAAGAACTCACAGGGCTTGAGTTACACGAAGGCGGACCGCCTGCCGCT GTTGTTTGGAACATCAAACACTTGCTTCAAACCGGTATTGGTACCGCCTCGCGACCTAGCGAGGTGTGTG TGGTGGACGGTACGAACATGTGTCTGGCTGATTTCCATGCAGGCATCTTCCTGAAAGGACAGGAACATGC CGTGTTTGCTTGTGTCACCTCCAACGGGTGGTACGCGATTGACGATGAGGACTTCTACCCATGGACGCCG GACCCGTCCGACGTTCTGGTGTTCGTTCCATATGATCAAGAACCACTCAACGGAGAATGGAAAATCAACG TTCAGCGGAAGCTCAAGGGAGCTGGACAATCCAGTCCGGCGACCGGCTCGCAGAACCAATCTGGCAATAC TGGCAGCATAATCAACAACTACTACATGCAACAGTACCAGAACTCCATGGACACACAACTTGGTGACAAC GCCATCAGCGGAGGCTCCAACGAGGGCTCCACAGACACAACTTCCAATCACACAACCAACACTCAGAACA ACGACTGGTTTTCCAAGCTCGCAGGTTCTGCCTTCAGCGGTCTTTTTGGCGCCCTTCTTGCTGACAAAAA GACAGAGGAAACCACTCTCCTCGAGGACCGCATCCTCACTACCCGCAACGGACACACGACCTCAACAACA CAGTCGAGTGTCGGAGTCACGTACGGGTATGCAACAGCTGAGGACTTTGTGAGTGGGCCAAACACTTCTG GTCTTGAAACCAGAGTTGTCCAGGCAGAACGCTTCTTCAAAACCCACCTCTTCGATTGGGTCACCAGTGA CCCATTCGGACGCTGCCACCTGTTGGAACTCCCAACTGACCACAAAGGTGTCTACGGAAGTCTGACCGAC TCGTACGCATATATGAGAAACGGTTGGGACGTTGAAGTCACCGCGGTTGGCAACCAGTTCAACGGAGGGT GTCTGTTGGTGGCGATGGTGCCAGAGCTTTGTTCCATCCAGAAGAGGGAGCTGTACCAGCTCACGCTCTT CCCCCATCAGTTCATCAACCCACGCACAAACATGACTGCGCACATCACTGTGCCTTTCGTTGGCGTCAAT CGCTACGACCAGTACAAGGTGCACAAACCTTGGACCCTCGTGGTTATGGTCGTAGCCCCCCTGACTGTCA ACACTGAAGGCGCTCCACAGATCAAGGTGTACGCCAACATTGCCCCAACCAACGTGTACGTAGCGGGCGA GTTTCCTTCCAAAGAGGGAATTTTCCCCGTAGCTTGCAGTGACGGCTATGGTGGCCTGGTGACCACGGAC CCGAAGACGGCTGACCCCGTTTACGGGAAAGTGTTTAACCCCCCACGCAACCTGCTGCCTGGGCGTTTTA CCAATCTCCTTGATGTGGCTGAGGCATGCCCGACGTTTCTGCACTTCGAGGGTGACGTGCCATACGTGAC CACGAAAACAGATTCAGACAGGGTGCTTGCCCAGTTTGACGTGTCCTTAGCAGCAAAGCACATGTCGAAC ACCTTTCTTGCAGGTCTCGCGCAGTACTATGCACAGTACAGTGGCACCATCAACCTGCACTTCATGTTTA CAGGACCCACTGACGCGAAAGCGCGTTACATGGTTGCTTACGCCCCACCGGGCATGGAGCCGCCCCGGAC GCCTGAGGCGGCTGCACACTGCATTCATGCTGAGTGGGACACTGGGCTAAACTCAAAGTTCACTTTCTCC ATCCCCTATCTTTCGGCTGCTGACTACGCATACACCGCGTCAGACGTGGCTGAAACCACGAACGTGCAAG GATGGGTCTGCTTGTTTCAAATCACGCACGGCAAAGCCGACGGCGACGCTTTGGTCGTGTTGGCTAGCGC TGGCAAGGACTTTGAGCTGAGGCTGCCGGTCGACGCCCGCAGAGAAACTACCTCTGCGGGTGAATCAGCA GATCCCGTGACTACCACTGTTGAGAACTACGGTGGTGAGACACAGGTCCAGAGGCGCCAACACACAGACG TCTCGTTCATCATGGACAGATTCGTGAAAGTGACACCGCAAGATCAAATCAACGTTTTGGACCTTATGCA GATCCCTGCCCACACGCTGGTGGGAGCGCTCCTGCGCGCGTCCACTTACTACTTCTCTGACCTGGAGATA GCAGTAAAGCACGAGGGAGACCTCACTTGGGTCCCGAACGGGGCGCCTGAAGCAGCGCTGGAGAACACCA CCAACCCAACAGCTTACCACAAGGCACCACTCACTCGGCTCGCCCTGCCTTACACGGCACCACACCGCGT GTTGGCAACCGTGTATAATGGAGTGTGCAAGTACAGTAAAACTGCTGTGCCCAACGTGAGAGGTGACACC CAGGTGTTGGATCAGAAGGCGTCGCGGGCGCTACCCACCTCCTTCAACTACGGTGCCATCAAAGCAACCC GAGTTAACGAGCTACTTTATCGGATGAAGAGGGCTGAGACATACTGTCCCAGGCCCTTGCTGGCTATCCA TCCAGCCGAAGCCAGACACAAACAGAAAATTGTGGCACCTGTGAAACAGACTTTGAACTTTGACCTTCTC AAGTTGGCTGGAGACGTGGAGTCCAACCCTGGGCCCTTCTTCTTCTCCGACGTCAGGTCAAATTTCTCCA AATTGGTAGAAACCATCAACCAGATGCAGGAGGACATCTCGACAAAACACGGGCCTGACTTTAACCGGTT GGTGTCTGCGTTTGAGGAATTGGCTACTGGAGTGAAAGCAATCAGGACCGGTCTCGACGAGGCCAAACCC TGGTACAAGCTTATTAAGCTCCTAAGCCGCCTGTCGTGTATGGCCGCTGTGGCAGCACGGTCCAAGGACC CAGTCCTTGTGGCCATCATGCTGGCCGACACCGGTCTCGAGATTCTGGACAGCACCTTTGTCGTGAAGAA AATTTCCGATTCGCTCTCCAGTCTCTTTCACGTGCCGGCCCCCGTCTTCAGTTTCGGAGCCCCGATCCTG TTGGCCGGGTTGGTCAAGGTCGCCTCGAGTTTCTTCCGGTCCACACCCGAAGACCTTGAGAGAGCAGAGA AACAGCTCAAAGCACGTGACATTAACGACATTTTCGCCGTTCTCAAGAACGGCGAGTGGCTGGTCAAGTT GATCCTTGCCATCCGCGACTGGATTAAGGCATGGATCGCCTCAGAGGAGAAGTTCGTCACCATGACAGAC CTGGTGCCTGGTATCCTTGAAAAGCAGCGGGACCTCAACGACCCAAGCAAGTACAAGGAAGCCAAGGAGT GGCTCGACAACGCGCGCCAAGCGTGTTTGAAGAACGGGAACGTCCACATCGCTAACCTGTGCAAAGTGGT CGCCCCAGCACCCAGCGAGTCGAGACCCGAACCCGTGGTCGTTTGCCTCCGTGGCAAGTCCGGCCAGGGC AAGAGTTTCCTTGCGAACGTGCTCGCGCAAGCAATCTCCACTCACTTTACTGGTAGAACCAATTCCGTTT GGTACTGCCCACCTGACCCTGACCACTTCGACGGCTACAACCAGCAGACCGTTGTAGTGATGGATGACCT GGGTCAGAACCCCGATGGCAAGGACTTCAAGTACTTCGCCCAAATGGTTTCAACCACGGGGTTCATCCCG CCCATGGCGTCACTCGAGGACAAAGGCAAACCTTTCAACAGCAAGGTCATCATCGCAACCACCAACCTGT ACTCGGGTTTTACCCCGAAGACTATGGTGTGCCCTGATGCGCTGAACCGGAGGTTCCACTTTGACATCGA CGTGAGCGCCAAGGACGGGTACAAAATTAACAACAAACTGGACATCGTCAAAGCACTTGAAGACACTCAC ACCAACCCGGTAGCAATGTTTCAGTACGACTGTGCCCTTCTCAACGGCACGGCCGTTGAAATGAAGAGAA TGCAGCAGGACTTGTTCAAGCCTCAACCACCCCTCCAGAACGTGTACCAGCTCGTTCAGGAGGTGATTGA ACGGGTCGAGCTCCACGAGAAAGTGTCGAGCCACCCGATTTTCAAGCAGATCTCAATTCCTTCCCAAAAA TCCGTGTTGTACTTCCTCATTGAGAAAGGTCAACACGAGGCGGCAATTGAATTCTTTGAGGGCATGGTGC ACGACTCCATCAAGGAGGAGCTCCGACCCCTCATCCAACGAACCTCATTTGTGAAACGCGCTTTTAAGCG TCTGAAGGAAAACTTTGAGACTGTTGCCCTGTGCTTGACCCTCTTGGCCAACATAGTGATCATGATCCGT GAAACCCACAAGAGGCAGAAGATGGTGGATGGCTCGGTGAATGAGCACATCGAGAAGGCAAACAACACCG CAGACGATGAAACTCTTGACGAGGCGGGAAAGAACCCTCTGGAAACCAGTGGTGCCAGCACCGTTGGCTT CAGAGAGAGAACTCTCACGGACCGAAAGGCGCGTGATGACGTGGGCTTCGAGCCCGCATATCCTGCTGAA GAGTACCCACAAGCTGAAGGACCCTACGCCGGGCCACTCGAGCGTCAGAGACCTCTGAAAGTGAGAGCCA AGCTCCCACAACAGGAGGGACCCTACGCTGGTCCGATGGAGAGACAGAAACCACTGAAAGTGAAAGTGAA AAACCCGGTCATTAAGGAAGGACCCTACGAAGGACCGGTGAAGAAGCCTGTCGCTTTGAAAGTGAAAGCC AAGAACTTAATTGTCACTGAGAGTGGTGCCCCACCGACCGACTTGCAAAAGATGGTCATGGGCAACACAA AGCCTGTTGAGCTTATCCTTGACGGGAAGACAGTAGCCATCTGCTGTGCTACTGGAGTGTTTGGTACTGC TTACCTCGTGCCTCGTCACCTTTTTGCAGAGAAGTATGACAAAATCATGTTGGACGGCAGAGCCATGACA GACAGTGACTACAGAGTGTTTGAGTTTGAGATTAAAGTAAAAGGACAGGACATGCTCTCGGACGCCGCAC TCATGGTACTCCACCGCGGGAACCGTGTGAGAGACATCACGAAACACTTTCGTGATACAGCAAGAATGAA GAAAGGCACTCCCGTTGTTGGTGTGATCAACAACGCAGACGTCGGGAGGCTGATTTTCTCTGGTGAGGCC CTCACCTACAAGGATATCGTAGTGTGCATGGATGGAGATACCATGCCTGGCCTTTTTGCCTATAAGGCCG CCACCAAGGCCGGTTACTGTGGAGGAGCCGTTCTCGCTAAGGACGGGGCTGACACGTTCATCGTCGGCAC TCACTCTGCAGGAGGCAATGGAGTAGGATACTGTTCGTGTGTTTCCAGGTCCATGCTTCAAAAGATGAAG GCACACATTGACCCCGAACCACACCACGAGGGTTTGGTTGTCAACACCAGAGATGTGGAAGAGCGCGTTC ACGTGATGCGCAAAACCAAGCTTGCACCCACCGTTGCACACGGTGTGTTCAACCCTGACTTTGGGCCTGC CGCCTTGTCTAACAAGGACCCGCGCCTGAACGAGGGTGTTGTCCTCGATGAAGCCATCTTCTCCAAACAC AAGGGAGACACAAAGATGTCCGAGGAAGACAAAGCGCTGTTCCGCCGTTGTGCTGCTGACTACGCCTCAC GCTTGCACAGCGTACTGGGTACAGCAAATGCCCCATTGAGCATCTACGAGGCAATCAAGGGCGTTGATGG ACTCGACGCCATGGAGCCAGACACTGCGCCTGGCCTCCCCTGGGCACTCCAGGGGAAACGTCGTGGCGCG CTCATCGATTTTGAGAACGGCACGGTCGGGCCCGAAGTCGAGGCTGCCTTGAAGCTCATGGAGAGAAGAG AATACAAATTTGTTTGCCAGACCTTCCTGAAGGACGAAATTCGCCCGATGGAGAAAGTACGTGCCGGCAA GACTCGCATTGTCGACGTTTTGCCCGTTGAACACATTCTTTACACCAGGATGATGATTGGCAGATTCTGT GCACAAATGCACTCAAACAACGGACCGCAAATTGGCTCAGCAGTCGGTTGTAACCCTGATGTTGATTGGC AAAGATTTGGCACACACTTCGCCCAATACAGAAACGTGTGGGACGTGGACTACTCGGCCTTCGATGCTAA CCACTGCAGTGACGCAATGAACATCATGTTTGAGGAAGTGTTCCGCACGGACTTTGGTTTTCACCCAAAT GCTGAGTGGATCCTGAAGACTCTCGTGAACACGGAACACGCCTATGAAAATAAACGTATCACTGTCGAGG GCGGGATGCCATCTGGTTGTTCCGCAACAAGCATCATCAACACAATCTTGAACAACATATATGTGCTCTA CGCCTTGCGTAGACACTATGAGGGAGTTGAGCTGGATACTTACACCATGATCTCATACGGAGACGACATC GTGGTGGCAAGTGACTACGATTTGGACTTTGAGGCTCTCAAGCCCCACTTTAAATCTCTCGGTCAAACCA TTACTCCAGCTGACAAAAGCGACAAAGGTTTTGTTCTCGGACATTCCATCACCGATGTCACTTTCCTCAA AAGACACTTCCACATGGATTATGGAACTGGGTTTTACAAACCTGTGATGGCCTCAAAGACTCTCGAGGCC ATTCTCTCCTTTGCACGCCGTGGGACCATACAGGAGAAGTTGATCTCCGTGGCAGGACTCGCCGTCCACT CCGGACCAGACGAGTACCGGCGTCTCTTTGAACCCTTCCAGGGCCTCTTTGAGATTCCAAGCTACAGATC ACTTTACCTGCGTTGGGTGAACGCCGTGTGCGGTGACGCATAATCCCTCAGAGATCACAATTGGCACAAT GACTCTGGGGCGCGCGACGCCGTAGGAGTGAAAAGCCCGAAGGGCTTCTCCCGCTTCCTTATCCCAAAAA AAAAAAAAAAA
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