Details of Virus RNA

  Strain Information Strain Name
Dengue virus 3 (strain H87)
Strain Family
Flaviviridae
RNA Binding Site
5'UTR - 3'UTR
  Virus Information Virus Name
Dengue virus 3 (DENV3)
Taxonomy ID 11069

Full list of proteins interacting with the 5'UTR - 3'UTR of this Strain

Protein Name Uniprot ID Host Species Pro Info Detection Method Infection Cell Cell ID Cell Originated Tissue Infection Time Interaction Score Fold Change
Eukaryotic initiation factor 4A-I P60842 Homo sapiens Pro Info Co-immunoprecipitation assays (Co-IP) A549 Cells (Adenocarcinoma human alveolar basal epithelial cell) . Lung 48 h . .
Eukaryotic initiation factor 4A-I P60842 Homo sapiens Pro Info Co-immunoprecipitation assays (Co-IP) A549 Cells (Adenocarcinoma human alveolar basal epithelial cell) . Lung 48 h . .

Functional Go Enrichment analysis of those proteins interacting with the 5'UTR - 3'UTR of this Strain

GO Term GO Category GO ID Adjusted P-value Odds Ratio Combined Score
RNA Cap Binding Molecular Function GO:0000339 0.00474989 19981 139049.211
Translation Initiation Factor Activity Molecular Function GO:0003743 0.005124906 19959 123544.8878
Double-Stranded RNA Binding Molecular Function GO:0003725 0.005416582 19935 114209.9261
mRNA Binding Molecular Function GO:0003729 0.017624847 19718 84030.01469
RNA Binding Molecular Function GO:0003723 0.070549764 18589 49287.56152
Cytoplasmic Translational Initiation Biological Process GO:0002183 0.00299994 19970 129851.1373
Cytoplasmic Translation Biological Process GO:0002181 0.004649936 19907 106918.5424

Functional KEGG Enrichment analysis of those proteins interacting with the 5'UTR - 3'UTR of this Strain

Pathways Category Adjusted P-value Odds Ratio Combined Score
RNA transport KEGG Pathway 0.009299903 19814 92684.96451

Virus RNA Sequence Information

>MK506265.1 Dengue virus type 3 isolate h87-2007, complete genome TACGTGGACCGACAAGAACAGTTTCGACTCGGAAGCTTGCTTAACGTAGTGCTGACAGTTTTTTATTAGA GAGCAGATCTCTGATGAACAACCAACGGAAAAAGACGGGAAAACCGTCTATCAATATGCTGAAACGCGTG AGAAACCGTGTGTCAACTGGATCACAGTTGGCGAAGAGATTCTCAAGAGGATTGCTGAACGGCCAAGGAC CAATGAAATTGGTTATGGCGTTTATAGCTTTCCTCAGATTTCTAGCCATTCCACCGACAGCAGGAGTCTT GGCTAGATGGGGTACCTTTAAGAAGTCGGGGGCTATTAAGGTCTTAAAAGGCTTCAAGAAGGAGATCTCA AACATGCTGAGCATTATCAACAAACGGAAAAAGACATCGCTCTGTCTCATGATGATGTTACCAGCAACAC TTGCTTTCCACTTAACTTCACGAGATGGAGAGCCGCGCATGATTGTGGGGAAGAATGAAAGAGGAAAATC CCTACTTTTTAAGACAGCCTCTGGAATCAACATGTGCACACTCATAGCCATGGATTTGGGAGAGATGTGT GATGACACGGTCACTTACAAATGCCCCCACATTACCGAAGTGGAGCCTGAAGACATTGACTGCTGGTGCA ACCTTACATCGACATGGGTGACTTATGGAACATGCAATCAAGCTGGAGAGCATAGACGCGATAAGAGATC AGTGGCGTTAGCTCCCCATGTCGGCATGGGACTGGACACACGCACTCAAACCTGGATGTCGGCTGAAGGA GCTTGGAGACAAGTCGAGAAGGTAGAGACATGGGCCCTTAGGCACCCAGGGTTTACCATACTAGCCCTAT TTCTTGCCCATTACATAGGCACTTCCTTGACCCAGAAAGTGGTTATTTTTATACTATTAATGCTGGTTAC CCCATCCATGACAATGAGATGTGTGGGAGTAGGAAACAGAGATTTTGTGGAAGGCCTATCGGGAGCCACG TGGGTTGACGTGGTGCTCGAGCACGGTGGGTGTGTGACTACCATGGCTAAGAACAAGCCCACGCTGGACA TAGAGCTTCAGAAGACCGAGGCCACCCAACTGGCGACCCTAAGGAAGCTATGCATTGAGGGAAAAATTAC CAACATAACAACCGACTCAAGATGTCCCACCCAAGGGGAAGCGATTTTACCTGAGGAGCAGGACCAGAAC TACGTGTGTAAGCATACATACGTGGACAGAGGCTGGGGAAACGGTTGTGGTTTGTTTGGCAAGGGAAGCT TGGTGACATGCGCGAAATTTCAATGTTTAGAATCAATAGAGGGAAAAGTGGTGCAACATGAGAACCTCAA ATACACCGTCATCATCACAGTGCACACAGGAGACCAACACCAGGTGGGAAATGAAACGCAGGGAGTTACG GCTGAGATAACATCCCAGGCATCAACCGCTGAAGCCATTTTACCTGGATATGGAACCCTCGGGCTAGAAT GCTCACCACGGACAGGTTTGGATTTCAATGAAATGATTTTATTGACAATGAAGAACAAAGCATGGATGGT ACATAGACAATGGTTCTTTGACTTACCCCTACCATGGACATCAGGAGCTACAACAGAAACACCAACTTGG AACAGGAGAGAGCTTCTTGTGACATTTAAAAATGCACATGCAAAAAAGCAAGAAGTAGTTGTCCTTGGAT CACAAGAGGGAGCAATGCATACAGCACTGACAGGAGCTACAGAGATCCAAACCTCAGGAGGCACAAGTAT TTTTGCGGGGCACTTAAAATGTAGACTCAAGATGGACAAATTGGAACTCAAGGGGATGAGCTATGCAATG TGCTTGAATACCTTTGTGTTGAAGAAAGAAGTCTCCGAAACGCAGCATGGGACAATACTCATTAAGGTTG AGTACAAAGGGGAAGATGCACCCTGCAAGATTCCTTTCTCCACGGAGGATGGACAAGGGAAAGCTCACAA TGGCAGACTGATCACAGCCAATCCAGTGGTGACCAAGAAGGAGGAGCCTGTCAACATTGAGGCTGAACCT CCTTTTGGGGAAAGTAATATAGTAATTGGAATTGGAGACAAAGCCCTGAAAATCAACTGGTACAGGAAGG GAAGCTCGATTGGGAAGATGTTCGAGGCCACTGCCAGAGGTGCAAGGCGCATGGCCATCTTGGGAGACAC AGCCTGGGACTTTGGATCAGTGGGTGGTGTTTTGAATTCATTAGGGAAAATGGTCCACCAAATATTTGGG AGTGCTTACACAGCCCTATTTAGTGGAGTCTCCTGGATAATGAAAATTGGAATAGGTGTCCTCTTAACCT GGATAGGGTTGAATTCAAAAAACACTTCTATGTCATTTTCATGCATTGCGATAGGAATCATTACACTCTA TCTGGGAGTCGTGGTGCAAGCTGACATGGGGTGTGTCATAAACTGGAAAGGCAAAGAACTCAAATGTGGA AGTGGAATTTTCGTCACTAATGAGGTCCACACCTGGACAGAGCAATACAAATTTCAAGCAGACTCCCCCA AAAGACTGGCAACAGCCATTGCAGGCGCTTGGGAGAATGGAGTGTGCGGAATTAGGTCAACAACCAGAAT GGAGAACCTCTTGTGGAAGCAAATAGCCAATGAACTGAACTACATATTATGGGAAAACAACATCAAATTA ACGGTAGTTGTAGGCGACATAACTGGGGTCTTAGAGCAAGGGAAAAGAACACTAACACCACAACCCATGG AGCTAAAATATTCTTGGAAAACATGGGGAAAGGCAAAAATAGTGACAGCTGAAACACAAAATTCCTCTTT CATAATAGATGGGCCAAGCACACCGGAGTGTCCAAGTGCCTCAAGAGCATGGAATGTGTGGGAGGTGGAA GATTACGGGTTCGGAGTTTTCACAACCAACATATGGCTGAAACTCCGAGAGGTGTACACCCAACTATGTG ACCATAGGCTAATGTCGGCAGCCGTCAAGGATGAGAGGGCCGTACACGCCGACATGGGCTATTGGATAGA AAGCCAAAAGAATGGAAGTTGGAAGCTAGAAAAAGCATCCCTCATAGAGGTGAAAACCTGCACATGGCCA AAATCACACACTCTTTGGAGCAATGATGTGCTAGAGAGTGACATGATTATCCCAAAGAGTCTAGCTGGTC CCATTTCGCAACACAACCACAGGCCCGGGTACCACACCCAAACGGCAGGACCCTGGCACTTAGGAAAATT GGAGCTGGACTTCAACTATTGTGAAGGAACAACAGTTGTCATCTCAGAAAACTGTGGGACAAGAGGCCCA TCATTGAGAACAACAACAGTGTCAGGGAAGTTGATACACGAATGGTGTTGCCGCTCGTGCACACTTCCTC CCCTGCGATACATGGGAGAAGACGGCTGCTGGTATGGCATGGAAATCAGACCCATTAATGAGAAAGAAGA GAACATGGTAAAGTCTCTAGCCTCAGCAGGGAGTGGAAAGGTGGACAACTTCACAATGGGTGTCTTGTGT TTGGCAATCCTCTTTGAAGAGGTGATGAGAGGAAAATTTGGGAAAAAACACATGATTGCAGGGGTTCTCT TCACGTTTGTGCTCCTCCTCTCAGGGCAAATAACATGGAGAGACATGGCGCACACACTCATAATGATTGG GTCCAACGCCTCTGACAGAATGGGGATGGGCGTCACTTACCTAGCTCTAATTGCAACATTTAAAATTCAG CCATTCTTGGCTTTGGGATTCTTCCTGAGGAAACTGACATCTAGAGAAAATTTATTGCTGGGAGTTGGGT TGGCCATGGCAGCAACGTTACGACTGCCAGAGGACATTGAACAAATGGCGAATGGAATTGCTTTGGGGCT CATGGCTCTTAAACTGATAACACAATTTGAAACATACCAACTATGGACGGCATTAGTTTCCCTAACGTGT TCAAATACAATTTTCACGTTGACTGTTGCCTGGAGAACAGCCACTCTGATTTTAGCCGGAATTTCGCTTT TGCCAGTGTGCCAGTCTTCGAGCATGAGGAAAACAGATTGGCTCCCAATGACTGTGGCAGCTATGGGAGT TCCACCCCTACCACTTTTTATTTTCAGTCTGAAAGATACACTCAAAAGGAGAAGCTGGCCACTGAATGAG GGGGTGATGGCAGTTGGACTTGTGAGCATTCTGGCTAGTTCTCTCCTTAGGAATGATGTGCCCATGGCTG GACCATTAGTGGCTGGGGGCTTGCTGATAGCGTGCTACGTCATAACTGGCACGTCAGCAGACCTCACTGT AGAAAAAGCAGCAGATGTAACATGGGAGGAAGAGGCCGAGCAAACAGGAGTGTCCCACAATTTAATGATC ACAGTTGATGATGATGGAACAATGAGAATAAAAGATGACGAGACTGAGAACATCTTAACAGTGCTTTTAA AAACAGCACTACTAATAGTATCAGGCATCTTTCCATACTCCATACCCGCAACACTGTTGGTCTGGCATAC TTGGCAAAAGCAAACCCAAAGATCCGGCGTCCTATGGGACGTACCCAGCCCCCCAGAGACACAGAAAGCG GAACTGGAAGAAGGGGTCTATAGGATCAAACAGCAAGGAATTTTTGGGAAAACCCAAGTGGGGGTTGGAG TACAGAAAGAAGGAGTTTTCCACACCATGTGGCACGTCACAAGAGGGGCAGTGTTGACACACAATGGGAA AAGACTGGAACCAAACTGGGCTAGCGTGAAAAAAGATCTGATTTCATACGGAGGAGGATGGAGATTGAGT GCACAATGGCAAAAGGGGGAGGAGGTGCAGGTTATTGCCGTAGAGCCTGGGAAGAACCCAAAGAACTTTC AAACCATGCCAGGCATTTTTCAGACAACAACAGGGGAAATAGGAGCAATTGCACTGGATTTCAAGCCTGG AACTTCAGGATCTCCCATCATAAACAGAGAGGGAAAGGTAGTGGGACTGTATGGCAATGGAGTGGTTACA AAGAATGGAGGCTATGTCAGTGGAATAGCGCAAACAAATGCAGAACCAGATGGACCGACACCAGAGTTGG AAGAAGAGATGTTCAAAAAGCGAAATCTAACCATAATGGATCTTCATCCTGGGTCAGGAAAGACGCGGAA ATATCTTCCAGCTATTGTTAGAGAGGCAATCAAGAGACGCTTAAGGACTCTAATTTTGGCACCAACAAGG GTAGTTGCAGCTGAGATGGAAGAAGCATTGAAAGGGCTCCCAATAAGGTATCAAACAACTGCAACAAAAT CTGAACACACAGGAAGAGAGATTGTTGATCTAATGTGTCACGCAACGTTCACAATGCGCTTGCTGTCACC AGTCAGGGTTCCAAACTACAACTTGATAATAATGGATGAGGCTCATTTCACAGACCCAGCCAGTATAGCG GCTAGAGGGTACATATCAACTCGTGTAGGAATGGGAGAGGCAGCCGCAATTTTCATGACAGCAACACCCC CTGGAACAGCTGATGCCTTTCCTCAGAGCAACGCTCCAATTCAAGATGAAGAGAGAGACATACCGGAACG CTCATGGAATTCAGGCAATGAATGGATTACTGACTTTGTTGGGAAGACAGTGTGGTTTGTCCCTAGCATC AAAGCCGGAAATGACATAGCAAACTGCTTGCGGAAAAATGGAAAAAAGGTCATTCAACTCAGCAGGAAGA CCTTTGACACAGAATATCAAAAGACCAAACTGAATGATTGGGACTTTGTGGTGACAACAGACATTTCAGA AATGGGAGCCAATTTCAAAGCAGATAGAGTGATCGACCCAAGAAGATGTCTCAAGCCGGTGATTTTGACA AATGGACCCGAGCGGGTGATCCTGGCTGGACCAATGCCAGTCACCGTAGCGAGCGCTGCGCAAAGGAGAG GGAGAGTTGGCAGGAACCCACAAAAAGAAAATGACCAGTACATATTCATGGGCCAGCCTCTCAACAATGA TGAAGACCATGCTCACTGGACAGAAGCAAAAATGCTGCTGGACAACATCAACACACCAGAAGGGATTATA CCAGCTCTCTTTGAACCAGAAAGGGAGAAGTCAGCCGCCATAGACGGCGAATACCGCCTGAAGGGTGAGT CCAGGAAGACTTTCGTGGAACTCATGAGGAGGGGTGACCTCCCAGTTTGGCTAGCCCATAAAGTAGCATC AGAAGGGATCAAATATACAGATAGAAAATGGTGCTTTGATGGAGAACGTAATAATCAAATTTTAGAGGAG AATATGGATGTGGAAATCTGGACAAAGGAAGGAGAAAAGAAAAAACTGAGACCTAGGTGGCTTGATGCCC GCACTTATTCAGATCCTTTAGCACTCAAGGAATTCAAGGATTTTGCAGCTGGCAGAAAGTCAATCGCCCT TGATCTTGTGACAGAAATAGGAAGAGTGCCTTCACACTTAGCCCACAGAACGAGAAACGCCCTGGACAAT TTGGTGATGCTGCACACGTCAGAACATGGCGGTAGGGCCTACAGGCATGCAGTGGAGGAACTACCAGAAA CGATGGAAACACTCTTACTCCTGGGACTGATGATCTTGTTAACAGGTGGAGCAATGCTCTTCTTGATATC AGGTAAAGGGATTGGAAAGACTTCAATAGGACTCATTTGTGTAATTGCTTCCAGCGGCATGTTATGGATG GCTGATGTCCCACTCCAATGGATCGCGTCGGCTATAGTCCTGGAGTTTTTTATGATGGTGTTGCTCATAC CAGAACCAGAAAAGCAGAGAACTCCCCAAGACAACCAACTCGCATATGTCGTGATAGGCATACTTACATT GGCTGCAATAGTAGCGGCCAATGAAATGGGACTGTTGGAAACTACAAAGAGAGATTTAGGAATGTCTAAA GAACCAGGTGTTGTTTCTTCAACCAGCTATTTGGACGTGGACTTGCACCCAGCATCAGCCTGGACATTGT ACGCCGTGGCCACAACAGTAATAACACCAATGTTGAGACACACCATAGAGAATTCCACAGCAAATGTGTC CCTGGCAGCCATAGCTAACCAGGCAGTGGTCCTGATGGGTTTAGACAAAGGATGGCCGATATCGAAAATG GACTTGGGCGTACCACTATTGGCACTGGGTTGCTATTCACAAGTGAACCCACTAACTCTTGCAGCGGCAG TACTTTTGCTAGTCACACATTATGCAATTATAGGTCCAGGATTGCAGGCAAAAGCCACTCGTGAAGCTCA GAAAAGGACAGCTGCTGGAATAATGAAGAATCCAACGGTGGATGGAATAATGACAATAGACCTAGATCCT GTAATATATGATTCAAAATTTGAAAAGCAACTAGGACAGGTTATGCTCCTGGTTCTGTGTGCAGTTCAAC TTTTGTTAATGAGAACATCATGGGCCTTGTGTGAAGTTCTAACCCTAGCCACAGGACCAATAACAACACT CTGGGAAGGATCACCTGGGAAGTTCTGGAACACCACGATAGCTGTTTCCATGGCGAACATCTTTAGAGGG AGCTATTTAGCAGGAGCTGGGCTTGCTTTTTCTATCATGAAATCAGTTGGAACAGGAAAGAGAGGAACAG GGTCACAAGGTGAAACCTTAGGAGAAAAGTGGAAAAAGAAATTAAATCAGTTATCCCGGAAAGAGTTTGA CCTTTACAAGAAATCCGGAATCACCGAAGTGGATAGAACAGAAGCCAAAGAAGGGTTAAAAAGAGGAGAA ATAACACACCATGCCGTGTCCAGAGGCAGCGCAAAACTTCAATGGTTCGTGGAGAGAAACATGGTCATTC CTGAAGGAAGAGTCATAGACTTAGGCTGTGGAAGAGGAGGCTGGTCATATTACTGTGCAGGACTGAAAAA AGTTACAGAAGTGCGAGGATACACAAAAGGCGGCCCAGGACACGAAGAACCAGTACCTATGTCTACATAC GGATGGAACATAGTCAAGTTAATGAGTGGAAAGGATGTTTTTTATCTGCCACCTGAAAAGTGTGATACCC TATTGTGTGACATTGGAGAATCTTCACCAAGCCCAACAGTGGAAGAAAGCAGAACCATAAGAGTCTTGAA GATGGTTGAACCATGGCTAAAAAACAACCAGTTTTGCATTAAAGTATTGAACCCATACATGCCAACTGTG ATTGAGCACTTAGAAAGACTACAAAGGAAACATGGAGGAATGCTTGTGAGAAATCCACTCTCACGAAACT CCACGCACGAAATGTATTGGATATCCAATGGTACAGGCAACATCGTCTCTTCAGTCAACATGGTATCCAG ATTGCTACTGAACAGATTCACAATGACACACAGGAGACCCACCATAGAGAAAGATGTGGATTTAGGAGCA GGAACCCGACATGTCAATGCGGAACCAGAAACACCCAACATGGATGTCATTGGGGAAAGAATAAAAAGGA TCAAAGAGGAGCATAGTTCAACATGGCACTATGATGATGAAAATCCTTACAAAACGTGGGCTTACCATGG ATCCTATGAAGTAAAAGCCACAGGCTCAGCCTCCTCCATGATAAATGGAGTCGTGAAACTCCTCACAAAA CCATGGGATGTGGTGCCCATGGTGACACAGATGGCAATGACAGATACAACTCCATTTGGCCAGCAAAGAG TTTTTAAAGAGAAAGTGGACACCAGGACACCTAGGCCCATGCCAGGAACAAGAAAGGTTATGGAGATCAC AGCGGAGTGGCTTTGGAGGACCCTGGGAAGGAACAAAAGACCCAGATTATGCACAAGGGAGGAGTTCACA AAGAAGGTCAGAACCAACGCAGCTATGGGCGCTGTCTTCACAGAAGAGAACCAATGGGACAGTGCGAGAG CTGCTGTTGAGGACGAAGAATTTTGGAAACTTGTGGACAGAGAACGTGAACTCCACAAACTGGGCAAGTG TGGAAGCTGCGTTTACAACATGATGGGCAAGAGAGAGAAAAAACTTGGAGAGTTTGGTAAAGCAAAAGGC AGTAGGGCTATATGGTACATGTGGTTGGGAGCCAGGTACCTTGAGTTCGAGGCGCTCGGATTCCTCAATG AAGACCACTGGTTCTCGCGTGAAAACTCTTACAGTGGAGTAGAAGGAGAAGGACTGCACAAGCTGGGATA CATCTTGAGAGATATTTCCAAGATACCCGGAGGAGCCATGTATGCTGATGACACAGCCGGTTGGGACACA AGAATAACAGAAGATGACCTGCACAATGAGGAAAAAATCACACAGCAGATGGACCCTGAACACAGGCAGC TAGCGAACGCTATATTCAAGCTCACATACCAAAACAAAGTGGTCAAAGTCCAACGACCAACTCCAAAGGG CACGGTAATGGACATCATATCTAGGAAAGACCAAAGAGGCAGTGGACAGGTGGGAACTTATGGTCTGAAC ACATTCACCAACATGGAAGCCCAGCTAATCAGACAAATGGAAGGAGAAGGCGTGTTGTCAAAGGCAGACC TCGAGAACCCCCATCCGCTAGAGAAGAAAATTACACAATGGTTGGAAACTAAAGGAGTGGAGAGGTTAAA AAGAATGGCCATCAGCGGGGATGATTGCGTAGTGAAACCAATCGACGACAGATTCGCCAATGCCCTGCTT GCCCTGAACGATATGGGAAAGGTTAGGAAGGACATACCTCAATGGCAGCCATCAAAGGGATGGCATGATT GGCAACAGGTCCCTTTCTGCTCCCACCACTTTCATGAATTGATCATGAAAGATGGAAGAAAGTTGGTAGT TCCCTGCAGACCCCAGGACGAACTAATAGGAAGAGCGAGAATCTCTCAAGGAGCAGGATGGAGCCTTAGA GAAACTGCATGTCTAGGGAAAGCCTACGCTCAAATGTGGACTCTCATGTATTTTCACAGAAGAGATCTTA GACTAGCATCCAACGCCATATGTTCAGCAGTACCAGTCCATTGGGTCCCCACGAGCAGAACGACATGGTC TATTCATGCTCACCATCAGTGGATGACTACAGAAGACATGCTTACTGTCTGGAACAGGGTGTGGATAGAG GACAATCCATGGATGGAAGACAAAACTCCAGTCACAACGTGGGAAGATGTTCCATATCTAGGGAAGAGAG AAGACCAATGGTGCGGATCATTCATAGGTCTCACTTCCAGAGCAACCTGGGCCCAGAACATACTCACAGC AATCCAACAGGTGAGAAGCCTCATAGGCAATGAAGAGTTTCTGGACTACATGCCTTCGATGAAGAGATTC AGGAAGGAGGAGGAGTCAGAGGGAGCCATTTGGTAAAAGCAGGAGGCAAACTGTCAGGCCACCTTAAGCC ACAGTACGGAAGAAGCTGTGCAGCCTGTGAGCCCCGTCCAAGGACGTTAAAAGAAGAAGTCAGGCCCAAA AGCCACGGTTTGAGCAAACCGTGCTGCCTGTAGCTCCGTCGTGGGGACGTAAAGCCTGGGAGGCTGCAAA CCGTGGAAGCTGTACGCACGGTGTAGCAGACTAGTGGTTAGAGGAGACCCCTCCCATGACACAACGCAGC AGCGGGGCCCGAGCACTGAGGGAAGCTGTACCTCCTTGCAAAGGACTAGAGGTTATAGGAGACCCCCCGC AAACAAAAACAGCATATTGACGCTGGGAGAGACCAGAGATCCTGCTGTCTCCTCAGCATCATTCCAGGCA CAGAACGCCA
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