Details of Virus RNA
Strain Information | Strain Name |
Mason-Pfizer monkey virus
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Strain Family |
Retroviridae
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RNA Binding Site |
5'UTR - 3'UTR
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Virus Information | Virus Name |
Mason-Pfizer monkey virus (MPMV)
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Taxonomy ID | 11855 |
Full list of proteins interacting with the 5'UTR - 3'UTR of this Strain
Protein Name | Uniprot ID | Host Species | Pro Info | Detection Method | Infection Cell | Cell ID | Cell Originated Tissue | Infection Time | Interaction Score | Fold Change |
---|---|---|---|---|---|---|---|---|---|---|
ATP-dependent RNA helicase A | Q08211 | Homo sapiens | Pro Info | . | B95a Cells (Marmoset lymphoblastoid cell line) | . | . | . | . | . |
ATP-dependent RNA helicase DDX3X | O00571 | Homo sapiens | Pro Info | . | B95a Cells (Marmoset lymphoblastoid cell line) | . | . | . | . | . |
Functional Go Enrichment analysis of those proteins interacting with the 5'UTR - 3'UTR of this Strain
Functional KEGG Enrichment analysis of those proteins interacting with the 5'UTR - 3'UTR of this Strain
Pathways | Category | Adjusted P-value | Odds Ratio | Combined Score |
---|---|---|---|---|
RIG-I-like receptor signaling pathway | KEGG Pathway | 0.020197329 | 288.826087 | 1433.612413 |
Hepatitis B | KEGG Pathway | 0.020197329 | 123.2111801 | 508.4661293 |
Viral carcinogenesis | KEGG Pathway | 0.020197329 | 98 | 382.416079 |
Virus RNA Sequence Information
>NC_001550.1 Mason-Pfizer monkey virus, complete genome
GCCACCATTAAATGAGACTTGATCAGAACACTGTCTTGTCTCCATTTCTTGTGTCTCTTGTTCCCTTCAA
TTCCCACTCCCTCCTCCAGGTTCCTACTGTTGATCCCGCGGGTCGGGACAGTTGGCGCCCAACGTGGGGC
TGGATACGAGGGAATTTCGTGAGGAAGACGACGCGTTCGCCGGCCGGCGATTAAAAGTGAAAGTAAACTC
TCTTGGCCGCCGCGGGAACCTGCCGCGTTGGACCTGAAAGTAAGTGTTGCGCTCGGATATGGGGCAAGAA
TTAAGCCAGCATGAACGTTATGTAGAACAATTGAAGCAGGCTTTAAAGACACGGGGAGTAAAGGTTAAAT
ATGCTGATCTTTTGAAATTTTTTGATTTTGTGAAGGATACTTGTCCTTGGTTTCCGCAAGAGGGAACCAT
AGATATTAAACGGTGGCGTAGAGTAGGCGACTGTTTCCAAGACTATTACAATACTTTTGGCCCGGAGAAA
GTCCCAGTAACTGCATTCTCTTACTGGAACTTAATTAAAGAATTGATAGATAAGAAAGAAGTTAACCCAC
AAGTAATGGCTGCCGTAGCCCAAACTGAAGAAATTTTAAAAAGTAATTCTCAAACAGACCTCACAAAGAC
CTCTCAAAACCCAGACTTGGACCTTATTTCCCTTGATAGCGACGATGAAGGAGCTAAAAGTTCCTCTCTA
CAAGATAAAGGTTTATCAAGTACTAAAAAACCAAAAAGATTCCCAGTTCTGTTAACAGCACAAACTAGTA
AAGACCCTGAAGACCCCAACCCCTCAGAGGTAGACTGGGACGGCTTGGAAGATGAGGCAGCGAAATATCA
TAATCCCGATTGGCCTCCCTTCCTAACCCGTCCACCTCCTTACAATAAAGCTACTCCTTCCGCACCCACT
GTAATGGCGGTTGTTAATCCAAAAGAGGAGCTCAAAGAAAAAATTGCTCAATTAGAGGAACAGATTAAAT
TAGAAGAGTTACACCAGGCACTAATTTCCAAATTACAAAAACTAAAAACAGGGAATGAAACTGTAACTCA
CCCAGACACAGCAGGAGGCCTTTCTCGCACGCCTCACTGGCCAGGGCAACATATCCCTAAAGGAAAATGT
TGCGCCAGTCGAGAAAAGGAAGAACAAATCCCAAAAGATATTTTCCCAGTGACTGAAACCGTTGATGGGC
AAGGTCAAGCCTGGAGACACCATAATGGTTTTGATTTTGCCGTCATAAAAGAATTAAAAACAGCTGCTTC
CCAATATGGGGCTACTGCCCCATACACATTAGCCATAGTGGAATCTGTAGCGGACAATTGGCTTACCCCT
ACAGATTGGAATACGCTTGTTAGGGCAGTCCTCTCAGGAGGAGATCACTTACTGTGGAAATCTGAGTTTT
TTGAAAATTGCAGAGATACGGCTAAAAGAAACCAACAAGCCGGTAATGGCTGGGATTTTGACATGTTAAC
AGGTTCGGGTAATTATTCCAGCACCGATGCACAAATGCAGTATGATCCAGGATTGTTTGCTCAAATTCAA
GCGGCTGCTACAAAAGCCTGGAGAAAACTTCCCGTTAAGGGAGACCCAGGAGCCTCCCTTACAGGAGTCA
AACAAGGACCCGATGAGCCATTTGCAGATTTCGTACACAGACTTATAACAACTGCTGGGAGAATCTTTGG
AAGTGCTGAGGCCGGTGTAGACTATGTAAAACAACTAGCATATGAAAATGCTAATCCAGCTTGTCAGGCA
GCCATTCGCCCCTATAGAAAGAAGACAGATTTAACTGGCTATATCCGTCTTTGCTCGGATATTGGGCCCT
CTTATCAGCAAGGCCTGGCCATGGCCGCCGCCTTTAGCGGGCAGACTGTAAAAGATTTTCTTAACAACAA
AAATAAAGAGAAAGGAGGGTGTTGCTTTAAATGCGGTAAAAAAGGACACTTTGCAAAAAATTGTCATGAA
CATGCACATAACAATGCTGAACCAAAAGTTCCCGGACTCTGCCCTAGATGTAAAAGAGGGAAACATTGGG
CCAATGAATGCAAATCCAAAACTGATAATCAAGGAAACCCAATACCACCCCATCAGGGAAACGGGTGGAG
GGGCCAGCCCCAGGCCCCGAAACAAGCTTATGGGGCAGTCAGCTTTGTTCCAGCCAACAAAAACAACCCA
TTTCAAAGCTTACCAGAGCCACCCCAGGAAGTGCAGGATTGGACCTCTGTTCCACCTCCCACACAGTATT
AACGCCTGAAATGGGGCCCCAAGCGTTAAGCACTGGAATATATGGACCACTGCCTCCCAACACTTTTGGA
TTAATCCTAGGCCGAAGTAGCATTACTATGAAGGGTCTACAAGTTTATCCAGGAGTAATTGATAATGACT
ATACCGGAGAAATTAAAATTATGGCAAAAGCTGTTAACAATATTGTTACTGTCTCTCAAGGCAACAGAAT
AGCTCAATTAATCCTCCTGCCTCTGATCGAGACAGACAATAAGGTACAACAACCTTATAGAGGACAAGGA
AGTTTTGGATCCTCAGACATATATTGGGTCCAACCTATTACTTGTCAAAAACCTTCCTTAACATTATGGT
TAGATGACAAAATGTTCACAGGCTTAATAGATACGGGGGCTGATGTCACAATTATCAAGCTGGAGGACTG
GCCTCCTAATTGGCCTATAACAGATACCTTAACCAATTTAAGAGGAATAGGACAAAGTAACAACCCTAAA
CAAAGTTCTAAATATCTTACTTGGAGAGATAAAGAAAACAATTCTGGTCTCATCAAACCGTTTGTTATTC
CTAACTTACCTGTCAATCTTTGGGGCCGAGATTTACTTTCTCAAATGAAAATTATGATGTGTAGCCCCAA
TGACATAGTAACTGCTCAAATGTTAGCCCAGGGCTACAGCCCAGGAAAAGGGTTAGGAAAAAAGGAAAAT
GGCATTCTACATCCTATCCCAAATCAAGGACAATCTAACAAAAAAGGTTTTGGAAATTTTTAACTGCGGC
CATTGACATACTTGCACCCCAACAGTGCGCTGAACCCATCACGTGGAAATCAGACGAACCTGTCTGGGTT
GATCAGTGGCCATTAACCAATGACAAACTTGCTGCTGCCCAACAGTTAGTGCAAGAACAGTTAGAGGCAG
GACATATTACTGAAAGTAGTTCTCCCTGGAACACTCCCATATTTGTTATAAAAAAGAAATCTGGTAAATG
GAGGCTCTTACAAGATTTACGAGCCGTTAATGCCACTATGGTATTAATGGGAGCTTTACAACCTGGATTA
CCCTCCCCGGTGGCTATCCCACAAGGGTATCTTAAAATAATTATTGATCTCAAGGATTGTTTCTTTTCTA
TTCCCCTTCATCCTAGTGACCAAAAAAGATTTGCCTTCAGCCTACCATCCACAAATTTTAAAGAACCTAT
GCAACGTTTTCAGTGGAAGGTTTTACCACAAGGTATGGCCAACAGTCCTACCTTATGTCAAAAATATGTG
GCCACAGCCATACATAAGGTTAGACATGCCTGGAAACAAATGTATATTATACATTACATGGATGACATCC
TAATAGCTGGTAAAGATGGACAACAAGTTTTGCAATGCTTTGATCAACTCAAACAAGAGTTGACTGCAGC
TGGGTTACATATAGCCCCAGAAAAAGTTCAATTACAAGATCCCTACACATATTTAGGATTTGAACTTAAT
GGTCCTAAAATCACTAATCAAAAAGCAGTCATTCGTAAAGATAAATTACAGACTCTTAATGATTTCCAAA
AACTTTTAGGAGACATCAATTGGCTCAGACCATATCTAAAACTCACTACTGGAGACTTAAAACCCTTATT
CGACACCCTTAAAGGAGACTCTGACCCCAATTCCCATAGATCCTTATCAAAAGAAGCTCTTGCCTCACTT
GAAAAGGTAGAGACAGCCATTGCAGAACAATTCGTTACTCACATAAATTATTCACTACCATTAATTTTCC
TCATATTCAACACAGCCCTGACACCTACTGGTTTGTTTTGGCAAGACAATCCTATTATGTGGATCCACCT
GCCTGCATCCCCTAAAAAGGTGTTACTTCCCTACTACGACGCTATAGCAGATTTAATCATACTAGGGAGA
GACCATAGTAAAAAATATTTTGGAATTGAACCCTCTACAATCATACAACCATATTCTAAGTCTCAGATTG
ATTGGTTAATGCAAAACACTGAAATGTGGCCAATTGCCTGTGCCTCCTTTGTTGGCATCCTAGATAACCA
TTATCCACCAAATAAACTTATCCAGTTCTGTAAACTACATACCTTTGTTTTCCCTCAAATCATTAGTAAA
ACACCCTTAAACAATGCCTTATTAGTTTTTACTGATGGCTCTTCCACTGGGATGGCCGCATATACTCTTA
CTGATACCACCATCAAATTCCAAACTAATCTTAATTCGGCTCAACTAGTAGAACTACAAGCTTTAATTGC
AGTCTTATCAGCCTTCCCTAATCAACCTCTTAATATTTACACTGACAGTGCTTACTTAGCCCACTCAATA
CCCCTACTTGAAACTGTCGCACAAATTAAACACATATCAGAAACAGCTAAACTGTTCCTACAGTGCCAGC
AACTCATATACAATAGATCCATACCTTTTTATATTGGACATGTCAGGGCCCATTCTGGACTACCTGGACC
CATAGCTCAAGGCAACCAACGAGCTGACTTGGCAACTAAAATCGTGGCTAGTAACATAAACACAAACCTC
GAATCAGCTCAAAATGCTCATACCTTACATCACCTCAATGCCCAGACTTTAAGACTTATGTTTAACATTC
CTAGAGAACAAGCTAGACAAATTGTTAAGCAATGTCCTATATGTGTAACTTATCTACCAGTCCCTCATTT
AGGAGTTAATCCTAGGGGATTATTTCCCAACATGATTTGGCAAATGGATGTTACACACTACTCAGAATTT
GGCAATTTAAAATATATTCATGTATCTATAGATACATTCAGTGGATTCCTACTGGCCACTCTACAAACAG
GAGAAACTACAAAACATGTCATAACCCATTTACTCCATTGCTTCTCTATTATTGGACTCCCTAAACAAAT
TAAAACGGATAACGGTCCTGGATACACCTCTAAAAATTTTCAAGAATTTTGCTCCACACTTCAAATTAAA
CATATTACTGGAATCCCCTATAACCCCCAAGGCCAAGGAATAGTTGAAAGAGCCCACTTATCTCTTAAAA
CCACCATTGAAAAGATAAAAAAGGGGGAATGGTACCCTAGGAAGGGTACCCCCAGGAACATCCTCAATCA
TGCACTCTTTATTCTAAATTTTTTAAATTTAGATGATCAAAATAAATCAGCAGCTGATCGTTTTTGGCAT
AATAACCCCAAAAAACAATTTGCCATGGTAAAATGGAAAGATCCATTAGATAATACATGGCATGGCCCCG
ATCCAGTGTTAATTTGGGGCAGAGGTTCAGTCTGTGTTTACTCTCAAACCTATGATGCCGCTAGATGGCT
ACCAGAACGGTTAGTAAGACAGGTGTCTAACAATAACCAATCCAGGGAGTGATTCTCTCCCTGAGATCGC
TCTTTCCCTTGTTCACAGATATGAACTTCAATTATCATTTCATCTGGAGCTTAGTGATACTATCTCAAAT
ATCTCAAGTTCAAGCCGGTTTTGGAGATCCGCGTGAAGCCCTGGCAGAAATACAACAAAAACATGGTAAA
CCTTGTGACTGTGCTGGAGGATATGTTTCCTCCCCACCGATTAACTCTCTTACAACTGTTTCTTGCTCTA
CTCATACTGCTTATTCAGTGACAAACTCCCTAAAATGGCAGTGTGTGTCAACTCCCACTACCCCTAGCAA
TACACATATAGGAAGTTGTCCCGGTGAATGCAACACGATCTCATATGATTCTGTACATGCCTCTTGCTAT
AACCACTATCAACAATGTAACATTGGTAATAAAACATATCTCACTGCCACTATAACTGGAGATAGAACTC
CTGCCATTGGTGACGGGAATGTCCCTACAGTACTAGGGACTAGTCACAACCTCATTACAGCAGGCTGTCC
CAATGGTAAAAAGGGCCAAGTGGTCTGTTGGAATAGCCGACCTTCTGTTCATATATCTGATGGAGGAGGG
CCTCAAGATAAGGCCCGCGACATTATAGTAAATAAAAAGTTTGAGGAATTGCACAGGTCGCTGTTCCCAG
AACTTTCTTACCATCCTCTGGCCTTGCCCGAAGCCCGTGGTAAAGAAAAAATTGACGCACACACTCTTGA
TCTCCTTGCCACTGTACATAGTTTACTCAATGCTTCCCAACCCAGTTTAGCCGAAGATTGCTGGCTGTGC
TTACAGTCAGGAGATCCCGTTCCTCTTGCCCTGCCCTATAATGATACACTCTGCTCTAACTTTGCCTGTT
TATCTAATCACTCCTGCCCTTTAACCCCCCCTTTTTTAGTACAGCCCTTTAACTTCACTGATTCCAATTG
CCTTTACGCTCATTATCAAAACAACTCATTTGACATAGATGTAGGTCTAGCTAGCTTTACTAATTGCTCT
AGCTATTATAACGTTTCTACAGCCTCCAAACCCTCTAATTCCCTATGCGCCCCAAACAGCTCGGTTTTTG
TATGCGGTAACAATAAGGCATACACTTATCTACCCACAAATTGGACGGGAAGTTGTGTACTTGCTACTCT
TTTGCCCGATATAGACATCATTCCAGGTAGTGAGCCTGTCCCCATTCCAGCTATTGATCATTTTTTAGGC
AAAGCCAAAAGAGCAATCCAACTTATCCCCCTGTTCGTAGGGTTAGGTATAACTACTGCAGTATCTACTG
GGGCTGCTGGTCTAGGGGTTTCCATCACTCAATATACAAAATTATCTCATCAACTAATATCAGATGTTCA
AGCTATTTCTAGCACTATACAAGATCTCCAAGATCAGGTAGACTCTCTAGCAGAAGTAGTACTGCAAAAC
AGAAGAGGATTAGATCTACTTACAGCAGAGCAGGGAGGTATCTGCTTAGCCTTACAGGAAAAATGTTGTT
TCTACGCCAATAAATCTGGAATCGTCAGAGACAAGATTAAAAACCTACAAGACGACTTAGAAAGACGCCG
AAGACAACTGATCGACAACCCATTTTGGACCAGTTTTCATGGATTCCTCCCTTATGTTATGCCCCTATTA
GGCCCTTTGCTTTGCTTATTGCTTGTGTTATCTTTCGGTCCAATTATTTTCAACAAGCTTATGACCTTTA
TTAAACATCAAATTGAGAGCATCCAGGCCAAACCTATACAAGTCCATTATCATCGCCTTGAACAAGAAGA
CAGTGGTGGCTCATATTTGACCTTAACATAGGCCACCTCCCCTGTGAGCTAGACTGGACAGCCAATGACG
GGTAAGAGAGTGACATTTCTCACTAACCTAAGACAGGAGGGCCGTCAAAGCTACTGCCTAATCCAATGAC
GGGTAATAGTGACAAGAAATGTATCACTCCAACCTAAGACAGGCGCAGCCTCCGAGGGATGTGTCTTTTG
TTTTTTATAATTAAAAAGGGTGACATGTCCGGAGCCGTGCTGCCCGGATGATGTCTTGGCCTCTGTTTGC
TCTAGCTCCATGTTATGAATTTAAGATGGCGTATTTCCTGGTTCTTCTCCGTCTTACTTTCCCGCCGGCG
CGAATGTTTCCCGCTCTTGGGCTTACGTGGCTTTCCTTGCTCTGCTACTGAGCATGCGCCCAGTATCTTT
CCCCTCCCACTTGCTGCCTGTGTATATAAGGCAACACATTGCCACCATTAAATGAGACTTGATCAGAACA
CTGTCTTGTCTCCATTTCTTGTGTCTCTTGTTCCCTTCAATTCCCACTCCCTCCTCCAGGTTCCTACTGT
TGATCCCGCGGGTCGGGACAGTTTTCGTTTTCTGTCCGGAGCCGTGCTGCCCGGATGATGTCTTGGCCTC
TGTTTGCTCTAGCTCCATGTTATGAATTTAAGATGGCGTATTTCCTGGTTCTTCTCCGTCTTACTTTCCC
GCCGGCGCGAATGTTTCCCGCTCTTGGGCTTACGTGGCTTTCCTTGCTCTGCTACTGAGCATGCGCCCAG
TATCTTTCCCCTCCCACTTGCTGCCTGTGTATATAAGGCAACACATTGCCACCATTAAATGAGACTTGAT
CAGAACACTGTCTTGTCTCCATTTCTTGTGTCTCTTGTTCCCTTCAATTCCCACTCCCTCCTCCAGGTTC
CTACTGTTGATCCCGCGGGTCGGGACAGTTGGCGCCCAACGTGGGGCACGAACCCACGACCCTGGGATTA
AGAGTCCCATGCTCTACCGACTGGATGATGTCTTGGCCTCTGTTTGCTCTAGCTCCATGTTATGAATTTA
AGATGGCGTATTTCCTGGTTCTTCTCCGTCTTACTTTCCCGCCGGCGCGAATGTTTCCCGCTCTTGGGCT
TACGTGGCTTTCCTTGCTCTGCTACTGAGCATGCGCCCAGTATCTTTCCCCTCCCACTTGCTGCCTGTGT
ATATAAGGCAACACATT
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