Details of Virus RNA

  Strain Information Strain Name
Foot-and-mouth disease virus-type O
Strain Family
Picornaviridae
RNA Binding Site
3D
  Virus Information Virus Name
Foot-and-mouth disease virus-type O (FMDV-O)
Taxonomy ID 12118

Full list of Host ncRNAs interacting with the Virus RNA

HncRNA Host Species HncRNA Detail PMID Source Target Gene Target Gene ID Target Gene Source PMID Source
miR-3D-1311 Mesocricetus auratus HncRNA Info 21663611 ViRBase . . . . .
miR-3D-657 Mesocricetus auratus HncRNA Info 21663611 ViRBase . . . . .
miR-3D-715 Mesocricetus auratus HncRNA Info 21663611 ViRBase . . . . .
miR-3D-983 Mesocricetus auratus HncRNA Info 21663611 ViRBase . . . . .

Virus RNA Sequence Information

>NC_039210.1 Foot-and-mouth disease virus O isolate o6pirbright iso58, complete genome TTGAAAGGGGGCGCTAGGGTTTCACCCCTAGCACGCCAACGACAGTCCCTGCGTTGCACTCCACACTTAC GTTCGCGTGCACGCGGGACCCGATGGACTTTCGTTCACCCACCTACGGTTGGACTCACGGCACCGCGTGG CCATTTTAGCTGGACCGTGTGGACGAACACCGCTTGCGCTTCTCGCGTGACCGGCTAGTACTCTGACCAC TCTCCGCCTACTTGGTCGCTGCGCTGTCTTGGGCACTCCTATTGGGGTCGTTCGACGCTCCACGGGCTCC CCCGTGCGGCGGGCTACGGTGATGGGGCCGTTTCGCGCGGGCTGATCGCCTGGTCTGCTTCGGCTGTCAC CCGAAGCCCGCCTTTCACCCCCCCCCCCCTAAGTTTTACCGTCGTTTCCGACGTAAAGGGGAAGTAACCA CAAGCTTGACACCGCCTGTCCCGGCGTTAAAGGGAAGTAACCACAAGCTTACAACCGCCTACCCCGGTGT TAATGGGATGTAACCACAAGATACACCTTCACCCGGAAGTAAAACGGCAAATTCACACAGTTTTGCCCGT TTTTCATGAGAAACGGGACGTCTGCGCACGAAACGCGCCGTCGCTTGAGGAGGACTTGTACAAACACGAT CTAAACAGGTTTCCCCAACTGACATACACCGTGCAATTTGAAACTCCGCCTGGTCTTTCCAGGTCTAGAG GGGTAACACTTTGTACTGTGCTTGACTCCACGCTCGGTCCACTGGCGAGTGTTAGTAACAGCACTGGTGC TTCGTAGCGGAGCATGGTGGCCGTGGGAACTCCTCCTTGGTAACAAGGACCCACGGGGCCGAAAGCCACG TCCTGACGGACCCACCATGTGTGCAACCCCAGCACGGCAACTTTTCTGTGAAACTCACTCTAAGGTGACA CTGATACTGGTATTCAAGTACTGGTGACAGGCTAAGGATGCCCTTCAGGTACCCCGAGGTAACACGCGAC ACTCGGGATCTGAGAAGGGGACTGGGGCTTCTGTAAAAGCGCCCAGTTTAAAAAGCTTCTATGCCTGGAT AGGTGACCGGAGGCCGGCGCCTTTCCATTATAACTACTGACTTTATGAACACAACTAACTGTTTTATCGC TTTGGTGTACGCTATCAGAGAGATCAGAACGCTTTTCCTTTCACGAGCTACAGGAAAGATGGAATTCACG CTGTACAACGGTGAAAAGAAGACCTTTTACTCCAGGCCCAACAACCACGACAACTGTTGGTTGAACACCA TCCTTCAGTTGTTCAGGTACGTCGATGAGCCTTTCTTCGACTGGGTCTACAACTCACCCCAGAACCTCAC GCTTGAAGCCATCAAACAGCTGGAAGAACTCACAGGGCTTGAGTTACACGAAGGCGGACCGCCTGCCGCT GTTGTTTGGAACATCAAACACTTGCTTCAAACCGGTATTGGTACCGCCTCGCGACCTAGCGAGGTGTGTG TGGTGGACGGTACGAACATGTGTCTGGCTGATTTCCATGCAGGCATCTTCCTGAAAGGACAGGAACATGC CGTGTTTGCTTGTGTCACCTCCAACGGGTGGTACGCGATTGACGATGAGGACTTCTACCCATGGACGCCG GACCCGTCCGACGTTCTGGTGTTCGTTCCATATGATCAAGAACCACTCAACGGAGAATGGAAAATCAACG TTCAGCGGAAGCTCAAGGGAGCTGGACAATCCAGTCCGGCGACCGGCTCGCAGAACCAATCTGGCAATAC TGGCAGCATAATCAACAACTACTACATGCAACAGTACCAGAACTCCATGGACACACAACTTGGTGACAAC GCCATCAGCGGAGGCTCCAACGAGGGCTCCACAGACACAACTTCCAATCACACAACCAACACTCAGAACA ACGACTGGTTTTCCAAGCTCGCAGGTTCTGCCTTCAGCGGTCTTTTTGGCGCCCTTCTTGCTGACAAAAA GACAGAGGAAACCACTCTCCTCGAGGACCGCATCCTCACTACCCGCAACGGACACACGACCTCAACAACA CAGTCGAGTGTCGGAGTCACGTACGGGTATGCAACAGCTGAGGACTTTGTGAGTGGGCCAAACACTTCTG GTCTTGAAACCAGAGTTGTCCAGGCAGAACGCTTCTTCAAAACCCACCTCTTCGATTGGGTCACCAGTGA CCCATTCGGACGCTGCCACCTGTTGGAACTCCCAACTGACCACAAAGGTGTCTACGGAAGTCTGACCGAC TCGTACGCATATATGAGAAACGGTTGGGACGTTGAAGTCACCGCGGTTGGCAACCAGTTCAACGGAGGGT GTCTGTTGGTGGCGATGGTGCCAGAGCTTTGTTCCATCCAGAAGAGGGAGCTGTACCAGCTCACGCTCTT CCCCCATCAGTTCATCAACCCACGCACAAACATGACTGCGCACATCACTGTGCCTTTCGTTGGCGTCAAT CGCTACGACCAGTACAAGGTGCACAAACCTTGGACCCTCGTGGTTATGGTCGTAGCCCCCCTGACTGTCA ACACTGAAGGCGCTCCACAGATCAAGGTGTACGCCAACATTGCCCCAACCAACGTGTACGTAGCGGGCGA GTTTCCTTCCAAAGAGGGAATTTTCCCCGTAGCTTGCAGTGACGGCTATGGTGGCCTGGTGACCACGGAC CCGAAGACGGCTGACCCCGTTTACGGGAAAGTGTTTAACCCCCCACGCAACCTGCTGCCTGGGCGTTTTA CCAATCTCCTTGATGTGGCTGAGGCATGCCCGACGTTTCTGCACTTCGAGGGTGACGTGCCATACGTGAC CACGAAAACAGATTCAGACAGGGTGCTTGCCCAGTTTGACGTGTCCTTAGCAGCAAAGCACATGTCGAAC ACCTTTCTTGCAGGTCTCGCGCAGTACTATGCACAGTACAGTGGCACCATCAACCTGCACTTCATGTTTA CAGGACCCACTGACGCGAAAGCGCGTTACATGGTTGCTTACGCCCCACCGGGCATGGAGCCGCCCCGGAC GCCTGAGGCGGCTGCACACTGCATTCATGCTGAGTGGGACACTGGGCTAAACTCAAAGTTCACTTTCTCC ATCCCCTATCTTTCGGCTGCTGACTACGCATACACCGCGTCAGACGTGGCTGAAACCACGAACGTGCAAG GATGGGTCTGCTTGTTTCAAATCACGCACGGCAAAGCCGACGGCGACGCTTTGGTCGTGTTGGCTAGCGC TGGCAAGGACTTTGAGCTGAGGCTGCCGGTCGACGCCCGCAGAGAAACTACCTCTGCGGGTGAATCAGCA GATCCCGTGACTACCACTGTTGAGAACTACGGTGGTGAGACACAGGTCCAGAGGCGCCAACACACAGACG TCTCGTTCATCATGGACAGATTCGTGAAAGTGACACCGCAAGATCAAATCAACGTTTTGGACCTTATGCA GATCCCTGCCCACACGCTGGTGGGAGCGCTCCTGCGCGCGTCCACTTACTACTTCTCTGACCTGGAGATA GCAGTAAAGCACGAGGGAGACCTCACTTGGGTCCCGAACGGGGCGCCTGAAGCAGCGCTGGAGAACACCA CCAACCCAACAGCTTACCACAAGGCACCACTCACTCGGCTCGCCCTGCCTTACACGGCACCACACCGCGT GTTGGCAACCGTGTATAATGGAGTGTGCAAGTACAGTAAAACTGCTGTGCCCAACGTGAGAGGTGACACC CAGGTGTTGGATCAGAAGGCGTCGCGGGCGCTACCCACCTCCTTCAACTACGGTGCCATCAAAGCAACCC GAGTTAACGAGCTACTTTATCGGATGAAGAGGGCTGAGACATACTGTCCCAGGCCCTTGCTGGCTATCCA TCCAGCCGAAGCCAGACACAAACAGAAAATTGTGGCACCTGTGAAACAGACTTTGAACTTTGACCTTCTC AAGTTGGCTGGAGACGTGGAGTCCAACCCTGGGCCCTTCTTCTTCTCCGACGTCAGGTCAAATTTCTCCA AATTGGTAGAAACCATCAACCAGATGCAGGAGGACATCTCGACAAAACACGGGCCTGACTTTAACCGGTT GGTGTCTGCGTTTGAGGAATTGGCTACTGGAGTGAAAGCAATCAGGACCGGTCTCGACGAGGCCAAACCC TGGTACAAGCTTATTAAGCTCCTAAGCCGCCTGTCGTGTATGGCCGCTGTGGCAGCACGGTCCAAGGACC CAGTCCTTGTGGCCATCATGCTGGCCGACACCGGTCTCGAGATTCTGGACAGCACCTTTGTCGTGAAGAA AATTTCCGATTCGCTCTCCAGTCTCTTTCACGTGCCGGCCCCCGTCTTCAGTTTCGGAGCCCCGATCCTG TTGGCCGGGTTGGTCAAGGTCGCCTCGAGTTTCTTCCGGTCCACACCCGAAGACCTTGAGAGAGCAGAGA AACAGCTCAAAGCACGTGACATTAACGACATTTTCGCCGTTCTCAAGAACGGCGAGTGGCTGGTCAAGTT GATCCTTGCCATCCGCGACTGGATTAAGGCATGGATCGCCTCAGAGGAGAAGTTCGTCACCATGACAGAC CTGGTGCCTGGTATCCTTGAAAAGCAGCGGGACCTCAACGACCCAAGCAAGTACAAGGAAGCCAAGGAGT GGCTCGACAACGCGCGCCAAGCGTGTTTGAAGAACGGGAACGTCCACATCGCTAACCTGTGCAAAGTGGT CGCCCCAGCACCCAGCGAGTCGAGACCCGAACCCGTGGTCGTTTGCCTCCGTGGCAAGTCCGGCCAGGGC AAGAGTTTCCTTGCGAACGTGCTCGCGCAAGCAATCTCCACTCACTTTACTGGTAGAACCAATTCCGTTT GGTACTGCCCACCTGACCCTGACCACTTCGACGGCTACAACCAGCAGACCGTTGTAGTGATGGATGACCT GGGTCAGAACCCCGATGGCAAGGACTTCAAGTACTTCGCCCAAATGGTTTCAACCACGGGGTTCATCCCG CCCATGGCGTCACTCGAGGACAAAGGCAAACCTTTCAACAGCAAGGTCATCATCGCAACCACCAACCTGT ACTCGGGTTTTACCCCGAAGACTATGGTGTGCCCTGATGCGCTGAACCGGAGGTTCCACTTTGACATCGA CGTGAGCGCCAAGGACGGGTACAAAATTAACAACAAACTGGACATCGTCAAAGCACTTGAAGACACTCAC ACCAACCCGGTAGCAATGTTTCAGTACGACTGTGCCCTTCTCAACGGCACGGCCGTTGAAATGAAGAGAA TGCAGCAGGACTTGTTCAAGCCTCAACCACCCCTCCAGAACGTGTACCAGCTCGTTCAGGAGGTGATTGA ACGGGTCGAGCTCCACGAGAAAGTGTCGAGCCACCCGATTTTCAAGCAGATCTCAATTCCTTCCCAAAAA TCCGTGTTGTACTTCCTCATTGAGAAAGGTCAACACGAGGCGGCAATTGAATTCTTTGAGGGCATGGTGC ACGACTCCATCAAGGAGGAGCTCCGACCCCTCATCCAACGAACCTCATTTGTGAAACGCGCTTTTAAGCG TCTGAAGGAAAACTTTGAGACTGTTGCCCTGTGCTTGACCCTCTTGGCCAACATAGTGATCATGATCCGT GAAACCCACAAGAGGCAGAAGATGGTGGATGGCTCGGTGAATGAGCACATCGAGAAGGCAAACAACACCG CAGACGATGAAACTCTTGACGAGGCGGGAAAGAACCCTCTGGAAACCAGTGGTGCCAGCACCGTTGGCTT CAGAGAGAGAACTCTCACGGACCGAAAGGCGCGTGATGACGTGGGCTTCGAGCCCGCATATCCTGCTGAA GAGTACCCACAAGCTGAAGGACCCTACGCCGGGCCACTCGAGCGTCAGAGACCTCTGAAAGTGAGAGCCA AGCTCCCACAACAGGAGGGACCCTACGCTGGTCCGATGGAGAGACAGAAACCACTGAAAGTGAAAGTGAA AAACCCGGTCATTAAGGAAGGACCCTACGAAGGACCGGTGAAGAAGCCTGTCGCTTTGAAAGTGAAAGCC AAGAACTTAATTGTCACTGAGAGTGGTGCCCCACCGACCGACTTGCAAAAGATGGTCATGGGCAACACAA AGCCTGTTGAGCTTATCCTTGACGGGAAGACAGTAGCCATCTGCTGTGCTACTGGAGTGTTTGGTACTGC TTACCTCGTGCCTCGTCACCTTTTTGCAGAGAAGTATGACAAAATCATGTTGGACGGCAGAGCCATGACA GACAGTGACTACAGAGTGTTTGAGTTTGAGATTAAAGTAAAAGGACAGGACATGCTCTCGGACGCCGCAC TCATGGTACTCCACCGCGGGAACCGTGTGAGAGACATCACGAAACACTTTCGTGATACAGCAAGAATGAA GAAAGGCACTCCCGTTGTTGGTGTGATCAACAACGCAGACGTCGGGAGGCTGATTTTCTCTGGTGAGGCC CTCACCTACAAGGATATCGTAGTGTGCATGGATGGAGATACCATGCCTGGCCTTTTTGCCTATAAGGCCG CCACCAAGGCCGGTTACTGTGGAGGAGCCGTTCTCGCTAAGGACGGGGCTGACACGTTCATCGTCGGCAC TCACTCTGCAGGAGGCAATGGAGTAGGATACTGTTCGTGTGTTTCCAGGTCCATGCTTCAAAAGATGAAG GCACACATTGACCCCGAACCACACCACGAGGGTTTGGTTGTCAACACCAGAGATGTGGAAGAGCGCGTTC ACGTGATGCGCAAAACCAAGCTTGCACCCACCGTTGCACACGGTGTGTTCAACCCTGACTTTGGGCCTGC CGCCTTGTCTAACAAGGACCCGCGCCTGAACGAGGGTGTTGTCCTCGATGAAGCCATCTTCTCCAAACAC AAGGGAGACACAAAGATGTCCGAGGAAGACAAAGCGCTGTTCCGCCGTTGTGCTGCTGACTACGCCTCAC GCTTGCACAGCGTACTGGGTACAGCAAATGCCCCATTGAGCATCTACGAGGCAATCAAGGGCGTTGATGG ACTCGACGCCATGGAGCCAGACACTGCGCCTGGCCTCCCCTGGGCACTCCAGGGGAAACGTCGTGGCGCG CTCATCGATTTTGAGAACGGCACGGTCGGGCCCGAAGTCGAGGCTGCCTTGAAGCTCATGGAGAGAAGAG AATACAAATTTGTTTGCCAGACCTTCCTGAAGGACGAAATTCGCCCGATGGAGAAAGTACGTGCCGGCAA GACTCGCATTGTCGACGTTTTGCCCGTTGAACACATTCTTTACACCAGGATGATGATTGGCAGATTCTGT GCACAAATGCACTCAAACAACGGACCGCAAATTGGCTCAGCAGTCGGTTGTAACCCTGATGTTGATTGGC AAAGATTTGGCACACACTTCGCCCAATACAGAAACGTGTGGGACGTGGACTACTCGGCCTTCGATGCTAA CCACTGCAGTGACGCAATGAACATCATGTTTGAGGAAGTGTTCCGCACGGACTTTGGTTTTCACCCAAAT GCTGAGTGGATCCTGAAGACTCTCGTGAACACGGAACACGCCTATGAAAATAAACGTATCACTGTCGAGG GCGGGATGCCATCTGGTTGTTCCGCAACAAGCATCATCAACACAATCTTGAACAACATATATGTGCTCTA CGCCTTGCGTAGACACTATGAGGGAGTTGAGCTGGATACTTACACCATGATCTCATACGGAGACGACATC GTGGTGGCAAGTGACTACGATTTGGACTTTGAGGCTCTCAAGCCCCACTTTAAATCTCTCGGTCAAACCA TTACTCCAGCTGACAAAAGCGACAAAGGTTTTGTTCTCGGACATTCCATCACCGATGTCACTTTCCTCAA AAGACACTTCCACATGGATTATGGAACTGGGTTTTACAAACCTGTGATGGCCTCAAAGACTCTCGAGGCC ATTCTCTCCTTTGCACGCCGTGGGACCATACAGGAGAAGTTGATCTCCGTGGCAGGACTCGCCGTCCACT CCGGACCAGACGAGTACCGGCGTCTCTTTGAACCCTTCCAGGGCCTCTTTGAGATTCCAAGCTACAGATC ACTTTACCTGCGTTGGGTGAACGCCGTGTGCGGTGACGCATAATCCCTCAGAGATCACAATTGGCACAAT GACTCTGGGGCGCGCGACGCCGTAGGAGTGAAAAGCCCGAAGGGCTTCTCCCGCTTCCTTATCCCAAAAA AAAAAAAAAAA
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