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DownloadDetails of Virus RNA
Full list of Host ncRNAs interacting with the Virus RNA
| HncRNA | Host Species | HncRNA Detail | PMID | Source | Target Gene | Target Gene ID | Target Gene Source | PMID | Source |
|---|---|---|---|---|---|---|---|---|---|
| hsa-miR-1259 | Homo sapiens | HncRNA Info | WO_2010_101663_A2 | ViRBase | . | . | . | . | . |
| hsa-miR-142-5p | Homo sapiens | HncRNA Info | WO_2010_101663_A2 | ViRBase | ZEB1 | . | miRTarBase | 23342264 | miRTarBase |
| hsa-miR-149-5p | Homo sapiens | HncRNA Info | WO_2010_101663_A2 | ViRBase | ZBTB2 | . | miRTarBase | 23144691 | miRTarBase |
| hsa-miR-16-5p | Homo sapiens | HncRNA Info | WO_2010_101663_A2 | ViRBase | ZYX | . | miRSponge | 21360639 | miRSponge |
| hsa-miR-17-5p | Homo sapiens | HncRNA Info | WO_2010_101663_A2 | ViRBase | ZNFX1 | . | miRSponge | 19734348 | miRSponge |
| hsa-miR-181b-5p | Homo sapiens | HncRNA Info | WO_2010_101663_A2 | ViRBase | XIAP | . | miRSponge | 22610076 | miRSponge |
| hsa-miR-1977 | Homo sapiens | HncRNA Info | WO_2010_101663_A2 | ViRBase | . | . | . | . | . |
| hsa-miR-1978 | Homo sapiens | HncRNA Info | WO_2010_101663_A2 | ViRBase | . | . | . | . | . |
| hsa-miR-19a-3p | Homo sapiens | HncRNA Info | WO_2010_101663_A2 | ViRBase | ZBTB4 | . | miRTarBase | 24220575 | miRTarBase |
| hsa-miR-222-3p | Homo sapiens | HncRNA Info | WO_2010_101663_A2 | ViRBase | ZNRD2 | . | miRTarBase | 26446789 | miRTarBase |
| hsa-miR-25-5p | Homo sapiens | HncRNA Info | WO_2010_101663_A2 | ViRBase | PRKCZ | . | miRTarBase | 27911275 | miRTarBase |
| hsa-miR-34a-3p | Homo sapiens | HncRNA Info | WO_2010_101663_A2 | ViRBase | XIAP | . | miRSponge | 22161761 | miRSponge |
| hsa-miR-34a-5p | Homo sapiens | HncRNA Info | WO_2010_101663_A2 | ViRBase | ZAP70 | . | miRSponge | 21205967 | miRSponge |
| hsa-miR-34b-3p | Homo sapiens | HncRNA Info | WO_2010_101663_A2 | ViRBase | ZAP70 | . | miRSponge | 21205967 | miRSponge |
| hsa-miR-34b-5p | Homo sapiens | HncRNA Info | WO_2010_101663_A2 | ViRBase | VEGFA | . | miRSponge | 18320040 | miRSponge |
| hsa-miR-34c-3p | Homo sapiens | HncRNA Info | WO_2010_101663_A2 | ViRBase | PSMG1 | . | miRTarBase | 26261507 | miRTarBase |
| hsa-miR-34c-5p | Homo sapiens | HncRNA Info | WO_2010_101663_A2 | ViRBase | ZAP70 | . | miRSponge | 21205967 | miRSponge |
| hsa-miR-92a-3p | Homo sapiens | HncRNA Info | WO_2010_101663_A2 | ViRBase | TP63 | . | miRSponge | 19608627 | miRSponge |
| hsa-miR-93-5p | Homo sapiens | HncRNA Info | WO_2010_101663_A2 | ViRBase | ZNRF3 | . | miRTarBase | 26423400 | miRTarBase |
Host ncRNA GO Enrichment
| GO Term | GO Category | GO ID | Adjusted P-value | Odds Ratio | Combined Score |
|---|---|---|---|---|---|
| DNA-binding Transcription Repressor Activity, RNA Polymerase II-specific | GO Molecular Function |
GO:0001227
|
0.02511302 | 22.43863636 | 167.0684147 |
| Vascular Endothelial Growth Factor Receptor 2 Binding | GO Molecular Function |
GO:0043184
|
0.052452425 | 219.5494505 | 1138.863728 |
| Cis-Regulatory Region Sequence-Specific DNA Binding | GO Molecular Function |
GO:0000987
|
0.052452425 | 6.90749543 | 35.56674006 |
| RNA Polymerase II Cis-Regulatory Region Sequence-Specific DNA Binding | GO Molecular Function |
GO:0000978
|
0.052452425 | 6.750626118 | 34.2409177 |
| Vascular Endothelial Growth Factor Receptor Binding | GO Molecular Function |
GO:0005172
|
0.052452425 | 139.6853147 | 668.1300945 |
| Platelet-Derived Growth Factor Receptor Binding | GO Molecular Function |
GO:0005161
|
0.052452425 | 139.6853147 | 668.1300945 |
| RNA Polymerase II Transcription Regulatory Region Sequence-Specific DNA Binding | GO Molecular Function |
GO:0000977
|
0.052452425 | 6.147420147 | 29.2793246 |
| Protein Kinase C Activity | GO Molecular Function |
GO:0004697
|
0.052452425 | 118.183432 | 547.142878 |
| Ubiquitin-Like Protein Transferase Activity | GO Molecular Function |
GO:0019787
|
0.054390042 | 13.82913165 | 61.31908584 |
| Cysteine-Type Endopeptidase Inhibitor Activity Involved In Apoptotic Process | GO Molecular Function |
GO:0043027
|
0.054390042 | 85.33333333 | 369.1390205 |
| WW Domain Binding | GO Molecular Function |
GO:0050699
|
0.054390042 | 80.83805668 | 345.5729133 |
| Ubiquitin Protein Ligase Activity | GO Molecular Function |
GO:0061630
|
0.062458411 | 10.61326861 | 41.84904958 |
| methyl-CpG Binding | GO Molecular Function |
GO:0008327
|
0.062458411 | 54.82967033 | 214.1775585 |
| Ubiquitin-Like Protein Ligase Activity | GO Molecular Function |
GO:0061659
|
0.062458411 | 10.34121977 | 40.28315812 |
| Frizzled Binding | GO Molecular Function |
GO:0005109
|
0.063020563 | 47.96634615 | 181.2321988 |
| Chemoattractant Activity | GO Molecular Function |
GO:0042056
|
0.063020563 | 45.14027149 | 167.9275753 |
| Non-Membrane Spanning Protein Tyrosine Kinase Activity | GO Molecular Function |
GO:0004715
|
0.063020563 | 43.84835165 | 161.9004351 |
| Phosphotyrosine Residue Binding | GO Molecular Function |
GO:0001784
|
0.064416709 | 40.3805668 | 145.9034914 |
| Protein Phosphorylated Amino Acid Binding | GO Molecular Function |
GO:0045309
|
0.070278271 | 34.86363636 | 121.0484196 |
| Ubiquitin-Protein Transferase Activity | GO Molecular Function |
GO:0004842
|
0.070329039 | 7.957723577 | 27.21571972 |
| Cell-Cell Junction | GO Cellular Component |
GO:0005911
|
0.024507426 | 18.14189189 | 124.1680669 |
| PAR Polarity Complex | GO Cellular Component |
GO:0120157
|
0.036744098 | 384.2692308 | 2173.545039 |
| Adherens Junction | GO Cellular Component |
GO:0005912
|
0.036744098 | 22.34009009 | 119.3108161 |
| T Cell Receptor Complex | GO Cellular Component |
GO:0042101
|
0.076028421 | 85.33333333 | 369.1390205 |
| Serine/Threonine Protein Kinase Complex | GO Cellular Component |
GO:1902554
|
0.145332734 | 25.98044329 | 82.85756067 |
| Platelet Alpha Granule Lumen | GO Cellular Component |
GO:0031093
|
0.145332734 | 23.57514793 | 72.98533527 |
| Cytoplasmic Stress Granule | GO Cellular Component |
GO:0010494
|
0.145332734 | 20.42153846 | 60.40719102 |
| Extrinsic Component Of Cytoplasmic Side Of Plasma Membrane | GO Cellular Component |
GO:0031234
|
0.145332734 | 20.15182186 | 59.35245231 |
| Platelet Alpha Granule | GO Cellular Component |
GO:0031091
|
0.145332734 | 17.39335664 | 48.77636969 |
| Tight Junction | GO Cellular Component |
GO:0070160
|
0.145332734 | 16.63377926 | 45.93648646 |
| Nucleus | GO Cellular Component |
GO:0005634
|
0.150168736 | 2.595123856 | 6.834504311 |
| Cytoplasmic Side Of Plasma Membrane | GO Cellular Component |
GO:0009898
|
0.159874885 | 12.42213884 | 30.855988 |
| Mitochondrial Outer Membrane | GO Cellular Component |
GO:0005741
|
0.17277285 | 10.17230769 | 23.35194453 |
| Membrane Raft | GO Cellular Component |
GO:0045121
|
0.17277285 | 9.074175824 | 19.86155962 |
| Organelle Outer Membrane | GO Cellular Component |
GO:0031968
|
0.17277285 | 9.02002731 | 19.69271818 |
| Intracellular Membrane-Bounded Organelle | GO Cellular Component |
GO:0043231
|
0.183470327 | 2.149883923 | 4.425767868 |
| Vesicle | GO Cellular Component |
GO:0031982
|
0.206396121 | 6.493096647 | 12.20857298 |
| Secretory Granule Lumen | GO Cellular Component |
GO:0034774
|
0.249556035 | 4.803663004 | 7.733213386 |
| Actin Cytoskeleton | GO Cellular Component |
GO:0015629
|
0.249556035 | 4.638980651 | 7.325539767 |
| Focal Adhesion | GO Cellular Component |
GO:0005925
|
0.266943387 | 3.905938621 | 5.584045604 |
| Negative Regulation Of DNA-templated Transcription | GO Biological Process |
GO:0045892
|
0.039888239 | 10.33006536 | 79.04112236 |
| Negative Regulation Of Cysteine-Type Endopeptidase Activity Involved In Apoptotic Process | GO Biological Process |
GO:0043154
|
0.039888239 | 70.70567376 | 533.9602068 |
| Negative Regulation Of Cysteine-Type Endopeptidase Activity | GO Biological Process |
GO:2000117
|
0.039888239 | 65.14705882 | 481.7596464 |
| Positive Regulation Of Signal Transduction | GO Biological Process |
GO:0009967
|
0.039888239 | 20.45247148 | 146.9041152 |
| Negative Regulation Of Cellular Component Organization | GO Biological Process |
GO:0051129
|
0.039888239 | 43.09307359 | 284.4455115 |
| Regulation Of Cysteine-Type Endopeptidase Activity Involved In Apoptotic Process | GO Biological Process |
GO:0043281
|
0.039888239 | 40.45528455 | 262.1187579 |
| Negative Regulation Of Transcription By RNA Polymerase II | GO Biological Process |
GO:0000122
|
0.039888239 | 10.13280632 | 65.5624348 |
| Regulation Of Peptidyl-Tyrosine Phosphorylation | GO Biological Process |
GO:0050730
|
0.039888239 | 37.68560606 | 239.0334062 |
| Positive Regulation Of Stress-Activated MAPK Cascade | GO Biological Process |
GO:0032874
|
0.039888239 | 32.17313916 | 194.2909427 |
| Regulation Of Protein-Containing Complex Assembly | GO Biological Process |
GO:0043254
|
0.039888239 | 28.3034188 | 163.9632123 |
| Regulation Of Retinal Ganglion Cell Axon Guidance | GO Biological Process |
GO:0090259
|
0.039888239 | 384.2692308 | 2173.545039 |
| Regulation Of Histone Deacetylase Activity | GO Biological Process |
GO:1901725
|
0.039888239 | 384.2692308 | 2173.545039 |
| Vascular Endothelial Growth Factor Receptor-2 Signaling Pathway | GO Biological Process |
GO:0036324
|
0.039888239 | 384.2692308 | 2173.545039 |
| Venous Blood Vessel Morphogenesis | GO Biological Process |
GO:0048845
|
0.039888239 | 384.2692308 | 2173.545039 |
| Positive Regulation Of T-helper 2 Cell Differentiation | GO Biological Process |
GO:0045630
|
0.039888239 | 384.2692308 | 2173.545039 |
| Zymogen Inhibition | GO Biological Process |
GO:0097341
|
0.039888239 | 384.2692308 | 2173.545039 |
| Regulation Of Mast Cell Chemotaxis | GO Biological Process |
GO:0060753
|
0.039888239 | 384.2692308 | 2173.545039 |
| Regulation Of Nitric Oxide Mediated Signal Transduction | GO Biological Process |
GO:0010749
|
0.039888239 | 384.2692308 | 2173.545039 |
| Negative Regulation Of Nucleic Acid-Templated Transcription | GO Biological Process |
GO:1903507
|
0.039888239 | 11.75978326 | 66.32181329 |
| Positive Regulation Of Interleukin-5 Production | GO Biological Process |
GO:0032754
|
0.039888239 | 307.4 | 1682.802968 |
Host ncRNA KEGG Pathway Enrichment
| Pathways | Category | Adjusted P-value | Odds Ratio | Combined Score |
|---|---|---|---|---|
| Focal adhesion | KEGG Pathway | 0.017107474 | 27.25619835 | 218.0513714 |
| MicroRNAs in cancer | KEGG Pathway | 0.029830664 | 17.48208469 | 117.8307142 |
| AGE-RAGE signaling pathway in diabetic complications | KEGG Pathway | 0.029830664 | 33.82312925 | 207.5042742 |
| NF-kappa B signaling pathway | KEGG Pathway | 0.029830664 | 32.49019608 | 196.8174748 |
| Relaxin signaling pathway | KEGG Pathway | 0.035117521 | 26.06167979 | 146.8578962 |
| Fluid shear stress and atherosclerosis | KEGG Pathway | 0.035117521 | 24.14720195 | 132.5469194 |
| Rap1 signaling pathway | KEGG Pathway | 0.066708681 | 15.84775641 | 74.3219585 |
| Ras signaling pathway | KEGG Pathway | 0.066708681 | 14.31594203 | 64.40468486 |
| Chemical carcinogenesis | KEGG Pathway | 0.066708681 | 13.88818565 | 61.69161573 |
| Human papillomavirus infection | KEGG Pathway | 0.111139697 | 9.957953394 | 38.10119973 |
| Primary immunodeficiency | KEGG Pathway | 0.120400779 | 41.47401247 | 150.9182076 |
| Bladder cancer | KEGG Pathway | 0.120400779 | 38.35769231 | 136.7009949 |
| Type II diabetes mellitus | KEGG Pathway | 0.12449092 | 34.08717949 | 117.6143623 |
| VEGF signaling pathway | KEGG Pathway | 0.142454412 | 26.42970822 | 84.72602362 |
| Renal cell carcinoma | KEGG Pathway | 0.142454412 | 22.53167421 | 68.77517599 |
| Pathways in cancer | KEGG Pathway | 0.142454412 | 6.130119723 | 18.14083325 |
| Pancreatic cancer | KEGG Pathway | 0.142454412 | 20.42153846 | 60.40719102 |
| PD-L1 expression and PD-1 checkpoint pathway in cancer | KEGG Pathway | 0.142454412 | 17.39335664 | 48.77636969 |
| Small cell lung cancer | KEGG Pathway | 0.142454412 | 16.81741336 | 46.62000033 |
| Th1 and Th2 cell differentiation | KEGG Pathway | 0.142454412 | 16.81741336 | 46.62000033 |
Virus RNA Sequence Information
|
>NC_002016.1 Influenza A virus (A/Puerto Rico/8/1934(H1N1)) segment 7, complete sequence
AGCGAAAGCAGGTAGATATTGAAAGATGAGTCTTCTAACCGAGGTCGAAACGTACGTTCTCTCTATCATC
CCGTCAGGCCCCCTCAAAGCCGAGATCGCACAGAGACTTGAAGATGTCTTTGCAGGGAAGAACACCGATC
TTGAGGTTCTCATGGAATGGCTAAAGACAAGACCAATCCTGTCACCTCTGACTAAGGGGATTTTAGGATT
TGTGTTCACGCTCACCGTGCCCAGTGAGCGAGGACTGCAGCGTAGACGCTTTGTCCAAAATGCCCTTAAT
GGGAACGGGGATCCAAATAACATGGACAAAGCAGTTAAACTGTATAGGAAGCTCAAGAGGGAGATAACAT
TCCATGGGGCCAAAGAAATCTCACTCAGTTATTCTGCTGGTGCACTTGCCAGTTGTATGGGCCTCATATA
CAACAGGATGGGGGCTGTGACCACTGAAGTGGCATTTGGCCTGGTATGTGCAACCTGTGAACAGATTGCT
GACTCCCAGCATCGGTCTCATAGGCAAATGGTGACAACAACCAACCCACTAATCAGACATGAGAACAGAA
TGGTTTTAGCCAGCACTACAGCTAAGGCTATGGAGCAAATGGCTGGATCGAGTGAGCAAGCAGCAGAGGC
CATGGAGGTTGCTAGTCAGGCTAGGCAAATGGTGCAAGCGATGAGAACCATTGGGACTCATCCTAGCTCC
AGTGCTGGTCTGAAAAATGATCTTCTTGAAAATTTGCAGGCCTATCAGAAACGAATGGGGGTGCAGATGC
AACGGTTCAAGTGATCCTCTCGCTATTGCCGCAAATATCATTGGGATCTTGCACTTGATATTGTGGATTC
TTGATCGTCTTTTTTTCAAATGCATTTACCGTCGCTTTAAATACGGACTGAAAGGAGGGCCTTCTACGGA
AGGAGTGCCAAAGTCTATGAGGGAAGAATATCGAAAGGAACAGCAGAGTGCTGTGGATGCTGACGATGGT
CATTTTGTCAGCATAGAGCTGGAGTAAAAAACTACCTTGTTTCTACT
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