Details of Virus RNA
Strain Information | Strain Name |
Enterovirus 71
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Strain Family |
Picornaviridae
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RNA Binding Site |
VP1
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Virus Information | Virus Name |
Enterovirus 71 (EV71)
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Taxonomy ID | 39054 | ||||||||
GeneBank ID | U22521 |
Full list of Host ncRNAs interacting with the Virus RNA
HncRNA | Host Species | HncRNA Detail | PMID | Source | Target Gene | Target Gene ID | Target Gene Source | PMID | Source |
---|---|---|---|---|---|---|---|---|---|
hsa-miR-296-5p | Homo sapiens | HncRNA Info | 23468506 | ViRBase | WNK4 | . | miRSponge | 20561597 | miRSponge |
hsa-miR-590-5p | Homo sapiens | HncRNA Info | 30291142 | ViRBase | TGFBR2 | . | OncomiRDB | 22684895 | OncomiRDB |
Host ncRNA GO Enrichment
Host ncRNA KEGG Pathway Enrichment
Pathways | Category | Adjusted P-value | Odds Ratio | Combined Score |
---|---|---|---|---|
Adherens junction | KEGG Pathway | 0.024048973 | 284.6857143 | 1409.030276 |
Pancreatic cancer | KEGG Pathway | 0.024048973 | 265.64 | 1296.720424 |
Chronic myeloid leukemia | KEGG Pathway | 0.024048973 | 265.64 | 1296.720424 |
Colorectal cancer | KEGG Pathway | 0.024048973 | 234.2705882 | 1114.690229 |
TGF-beta signaling pathway | KEGG Pathway | 0.024048973 | 214.0322581 | 999.398785 |
AGE-RAGE signaling pathway in diabetic complications | KEGG Pathway | 0.024048973 | 201 | 926.1393827 |
Chagas disease | KEGG Pathway | 0.024048973 | 197 | 903.817489 |
Th17 cell differentiation | KEGG Pathway | 0.024048973 | 187.6603774 | 852.0109803 |
Osteoclast differentiation | KEGG Pathway | 0.024048973 | 157.7142857 | 689.1038134 |
Relaxin signaling pathway | KEGG Pathway | 0.024048973 | 155.234375 | 675.8504863 |
FoxO signaling pathway | KEGG Pathway | 0.024048973 | 152.8307692 | 663.042174 |
Gastric cancer | KEGG Pathway | 0.024048973 | 134.1216216 | 564.6667428 |
Cellular senescence | KEGG Pathway | 0.024048973 | 128.0193548 | 533.1206666 |
Hepatitis B | KEGG Pathway | 0.024048973 | 123.2111801 | 508.4661293 |
Hippo signaling pathway | KEGG Pathway | 0.024048973 | 122.4444444 | 504.5515396 |
Hepatocellular carcinoma | KEGG Pathway | 0.024048973 | 118.748503 | 485.7488842 |
Transcriptional misregulation in cancer | KEGG Pathway | 0.025807699 | 103.7015707 | 410.4134142 |
Diabetic cardiomyopathy | KEGG Pathway | 0.025807699 | 98 | 382.416079 |
Human T-cell leukemia virus 1 infection | KEGG Pathway | 0.026365847 | 90.73394495 | 347.2153072 |
Endocytosis | KEGG Pathway | 0.028797949 | 78.67330677 | 290.0852446 |
Virus RNA Sequence Information
>U22521.1 Human enterovirus 71 polyprotein gene, complete cds
TTAAAACAGCTGTGGGTTGTCACCCACCCACAGGGTCCACTGGGCGCTAGTACACTGGTATCTCGGTACC
TTTGTACGCCTGTTTTATACCCCCTCCCTGATTTGCAACTTAGAAGCAACGCAAACCAGATCAATAGTAG
GTGTGACATACCAGTCGCATCTTGATCAAGCACTTCTGTATCCCCGGACCGAGTATCAATAGACTGTGCA
CACGGTTGAAGGAGAAAACGTCCGTTACCCGGCTAACTACTTCGAGAAGCCTAGTAACGCCATTGAAGTT
GCAGAGTGTTTCGCTCAGCACTCCCCCCGTGTAGATCAGGTCGATGAGTCACCGCATTCCCCACGGGCGA
CCGTGGCGGTGGCTGCGTTGGCGGCCTGCCTATGGGGTAACCCATAGGACGCTCTAATACGGACATGGCG
TGAAGAGTCTATTGAGCTAGTTAGTAGTCCTCCGGCCCCTGAATGCGGCTAATCCTAACTGCGGAGCACA
TACCCTTAATCCAAAGGGCAGTGTGTCGTAACGGGCAACTCTGCAGCGGAACCGACTACTTTGGGTGTCC
GTGTTTCTTTTTATTCTTGTATTGGCTGCTTATGGTGACAATTAAAGAATTGTTACCATATAGCTATTGG
ATTGGCCATCCAGTGTCAAACAGAGCTATTGTATATCTCTTTGTTGGATTCACACCTCTCACTCTTGAAA
CGTTACACACCCTCAATTACATTATACTGCTGAACACGAAGCGATGGGCTCCCAGGTCTCCACACAGCGA
TCCGGCTCGCATGAGAATTCCAACTCAGCCACGGAAGGCTCCACTATAAATTACACAACCATTAATTACT
ACAAAGACTCGTATGCTGCCACTGCTGGAAAGCAAAGTCTCAAACAAGATCCTGACAAGTTTGCGAACCC
TGTGAAGGACATCTTTACTGAAATGGCAGCGCCCTTAAAGTCTCCCTCTGCTGAAGCATGTGGCTATAGC
GACCGAGTGGCACAGCTTACCATTGGAAATTCCACCATTACTACACAAGAAGCAGCAAACATAATAGTTG
GGTATGGTGAGTGGCCTTCATACTGCTCTGATAATGATGCAACAGCGGTAGACAAACCTACACGGCCTGA
TGTCTCAGTAAATAGATTTTACACGCTAGACACTAAGCTATGGGAGAAATCATCCAAGGGGTGGTACTGG
AAGTTCCCAGATGTACTGACTGAAACCGGAGTTTTTGGTCCAAATGCACAATTTCACTACTTATACCGTT
CAGGGTTCTGCATCCACGTTCAATGTAACGCTAGCAAATTTCACCAAGGGGCGCTACTCGTTGCGGTATT
GCCCGAGTATGTCATTGGAACAGTGGCAGGCGGCACAGGCACAGAGAACAGTCACCCTCCTTATAAACAA
ACCCAACCCGGCGCTGATGGATTTGAATTACAACATCCATATGTTCTTGATGCTGGAATTCCAATATCTC
AGTTGACAGTGTGCCCTCACCAGTGGATCAATTTACGAACCAACAATTGTGCCACCATAATAGTGCCATA
CATGAACACACTACCTTTTGATTCCGCATTGAACCACTGTAATTTCGGACTATTGGTGGTGCCTATCAGC
CCGCTGGATTTCGACCAAGGGGCGACACCGGTAATTCCTATCACTATCACGTTGGCTCCGATGTGTTCTG
AGTTTGCGGGTCTCAGGCAGGCAGTTACGCAGGGTTTTCCCACTGAATTGAAACCTGGCACTAATCAGTT
CTTAACCACGGATGATGGTGTGTCAGCACCTATATTGCCAAATTTCCACCCCACCCCGTGCATTCACATA
CCTGGCGAGGTTAGAAACTTACTAGAACTGTGCCAGGTAGAAACCATTTTAGAAGTCAACAATGTGCCCA
CCAACGCAACCAGTTTGATGGAAAGGCTACGGTTTCCAGTGTCAGCCCAAGCAGGGAAAGGTGAGTTGTG
TGCAGTGTTCAGGGCCGACCCTGGGAGGGATGGTCCTTGGCAATCCACCATGCTAGGCCAGTTGTGTGGA
TATTACACCCAATGGTCAGGGTCTTTGGAAGTCACTTTTATGTTCACCGGATCCTTTATGGCAACTGGTA
AAATGCTTATAGCTTACACACCCCCAGGGGGCCCTTTGCCTAAAGATAGAGCCACAGCTATGCTGGGGAC
GCACGTCATCTGGGACTTTGGCTTGCAATCGTCCGTCACCCTCGTCATACCATGGATCAGTAACACTCAC
TATAGGGCGCATGCTCGAGATGGGGTGTTTGATTACTACACCACAGGTTTGGTTAGTATATGGTACCAAA
CAAATTATGTAGTCCCTATTGGAGCACCTAATACTGCCTATATAATAGCGTTGGCAGCAGCCCAAAAGAA
TTTCACTATGAAATTGTGCAAGGACACCAGTGACATTTTGGAAACGGCCACTATTCAAGGGGACAGAGTG
GCAGATGTGATTGAGAGCTCTATAGGAGATAGTGTGAGTAAGGCCCTCACCCCAGCTTTACCTGCACCCA
CAGGCCCAGACACCCAAGTGAGCAGTCATCGCTTAGACACTGGAAAAGTACCAGCACTTCAAGCCGCCGA
AATCGGAGCTTCGTCGAATGCTAGTGATGAGAGTATGATTGAGACTCGGTGTGTTCTTAACTCACATAGC
ACAGCTGAAACCACCCTTGATAGTTTCTTCAGCAGAGCAGGCTTAGTTGGGGAGATAGATCTTCCTCTAA
AGGGCACCACCAATCCGAACGGGTATGCCAACTGGGACATAGACATAACCGGTTATGCGCAGATGCGCAG
AAAAGTGGAACTATTCACCTATATGCGCTTTGACGCAGAGTTCACTTTTGTCGCGTGCACACCTACCGGA
AGGGTCGTTCCACAGCTGCTTCAATACATGTTTGTTCCACCCGGGGCCCCCAAACCAGACTCCAGAGACT
CTTTGGCTTGGCCAACGGCCACGAACCCCTCAGTTTTTGTCAAATCATCCGACCCACCAGCACAAGTCTC
AGTGCCATTTATGTCACCTGCAAGCGCATACCAATGGTTTTATGACGGATACCCTACATTTGGAGAGCAC
AAGCAAGAGAAGGATCTCGAGTATGGGGCATGCCCGAATAACATGATGGGCACATTCTCAGTGCGGACTG
TGGGATCGTCAAAGTCAGAATATTCCTTAGTCATCAGAATATACATGAGAATGAAGCACGTCAGAGCGTG
GATACCTCGGCCGATGCGCAATCAGAACTATTTGTTCAAATCCAACCCAAACTATGCTGGTGATTCCATT
AAACCAACTGGTACCAGCCGAACGGCAATCACTACGCTCGGGAAATTCGGTCAGCAGTCTGGGGCTATTT
ATGTGGGCAACTTTAGGGTAGTAAACAGACACCTAGCCACCCATACTGACTGGGCCAACTTGGTGTGGGA
AGACAGCTCTAGAGACCTCCTAGTTTCTTCAACTACCGCTCAAGGGTGTGACACCATTGCTCGATGTAAC
TGCCAAACCGGAGTGTATTACTGTAACTCTCGCAGAAAACACTATCCAGTCAGTTTTTCGAAACCTAGTT
TGGTGTTTGTAGAAGCTAGTGAGTATTATCCAGCTAGATATCAGTCCCATCTTATGCTTGCTGAGGGCCA
TTCAGAACCTGGTGATTGTGGCGGTATTCTTAGATGCCAACACGGTGTGGTGGGAATTGTCTCCACTGGC
GGAAGTGGCCTTGTGGGATTTGCTGACGTTAGAGATCTTCTGTGGCTAGATGAGGAAGCGATGGAGCAGG
GGGTATCTGATTACATCAAAGGTCTCGGTCGAGCCTTCGGCACAGGTTTCACTGACGCAGTGTCTAGGGA
AGTGGAAGCGTTGAAGAACCACTTAATCGGCTCCGAAGGGGCTGTTGAGAAGATCTTGAAGAACTTGGTG
AAGCTAATTTCAGCCTTAGTTATAGTCATCAGAAGTGATTATGATATGGTCACCCTCACAGCCACACTAG
CTCTGATCGGGTGCCACGGGAGTCCTTGGGCGTGGATCAAATCAAAGACAGCTTCCATACTGGGCATTCC
CATGGCACAAAAACAGAGTGCCTCATGGCTAAAGAAGTTCAATGACATGGCAAATGCTGCAAAAGGGCTT
GAGTGGATTTTCAACAAGATCAGTAAGTTCATTGACTGGCTTAAAGAGAAGATCATTCCAGCTGCCAAAG
AGAAAGTTGAGTTTTTGAACAACCTAAAACAGCTCCCCTTGTTGGAGAACCAAGTCTCCAATCTTGAACA
GTCTGCTGCCTCACAAGAAGACTTAGAAGCTATGTTTGGTAATGTGATATATCTGGCTCACTTTTGCCGC
AAATTCCAACCACTCTACGCAACTGAGGCCAAGAGAGTCTACGCTTTAGAGAAAAGGATGAATAACTACA
TGCAGTTCAAGAGCAAACACCGTATTGAACCTGTATGCTTGATCATCAGAGGTTCCCCCGGAACGGGCAA
ATCGCTCGCCACAGGCATTATAGCTAGAGCCATTGCTGACAAGTATCGCTCTAGTGTATACTCACTCCCC
CCAGACCCAGATCACTTTGATGGGTATAAGCAACAGGTGGTCGCGGTCATGGATGATCTCTGCCAGAACC
CGGACGGAAAAGACATGTCCCTATTTTGTCAAATGGTTTCTACAGTAGATTTTGTACCACCCATGGCATC
ACTAGAGGAGAAAGGAGTGTCCTTCACCTCTAAGTTTGTCATTGCATCGACCAATGCTAGTAACATCATA
GTCCCCACAGTTTCAGATTCAGATGCAATTCGCAGGCGATTCTATATGGACTGCGATATAGAAGTGACAG
ATTCTTACAAGACAGACCTCGGTCGGCTGGACGCAGGTAGAGCTGCCAAGCTTTGTACAGAAAATAACAC
TGCTAATTTTAAGAGATGCAGCCCACTGGTGTGTGGTAAGGCTATTCAGCTGAGAGACAGGAAGTCCAAA
GTGAGATATAGCGTCGACACCGTGGTATCGGAACTGATCAGAGAGTACAACAATAGATCTGCTATTGGGA
ATACTATAGAAGCACTCTTTCAAGGACCCCCTAAATTCAGGCCTATAAGAATTAGTCTCGAAGAAAAGCC
AGCCCCAGATGCCATTAGCGATCTCCTCGCTAGTGTAGATAGCGAGGAGGTGCGTCAGTACTGCAGGGAA
CAAGGCTGGATCATCCCTGAAACTCCCACCAATGTTGAGCGTCACCTCAATAGAGCAGTATTGGTAATGC
AGTCCATCGCCACTGTGGTTGCAGTTGTGTCTCTTGTTTATGTCATTTATAAGCTGTTTGCCGGGTTCCA
GGGTGCTTACTCTGGAGCGCCCAAGCCCATTCTCAAGAAGCCCGTGTTAAGAACAGCCACGGTCCAAGGG
CCCAGCTTAGACTTCGCCTTGTCTCTTTTGAGGCGCAACATTAGACAAGCGCAAACTGACCAAGGACACT
TCACCATGCTAGGAGTGCGAGATCGCCTAGCCATCCTGCCGCGCCACTCGCAACCAGGGAAGACCATCTG
GGTAGAGCATAAATTAATCAATGTACTAGATGCAGTTGAGTTGGTGGATGAGCAAGGTGTAAACTTGGAA
CTCACACTGGTAACTTTGGACACCAATGAAAAATTTAGGGATATCACCAAGTGTATCCCAGAAGTGATCA
CCGGGGCGAGTGACGCAACTCTAGTCATCAACACTGAGCACATTCCCTCAATGTTTGTGCCGGTGGGTGA
CGTTGTGCAGTACGGTTTCTTGAACCTTAGTGGTAAACCCACACACAGAACCATGATGTATAACTTCCCC
ACGAAGCCAGGACAGTGTGGGGGGGTGGTTACCTCAGTTGGTAAGATCATTGGAATCCACATTGGCGGGA
ATGGACGCCAGGCCTTTTGCGCTGGCCTAAAGAGGAGTTATTTTGCCAGCGAGCAAGGAGAGATCCAGTG
GATGAAGCCTAACAGAGAAACCGGGAGGTTGAATATTAATGGTCCAACCCGAACTAAGCTGGAACCCAGT
GTATTCCATGATGTGTTCGAGGGCAACAAGGAACCAGCGGTCCTGACTAGTAAGGACCCCAGACTTGAGG
TTGATTTTGAGCAAGCTTTGTTCTCCAAGTATGTGGGTAACACCCTGCATGAACCTGATGAGTACGTGAC
ACAGGCTGCTCTCCACTACGCAAATCAGCTGAAGCAACTGGACATCAACACCAGCAAGATGAGCATGGAA
GAAGCGTGCTATGGCACAGAATATTTAGAAGCTATAGACTTGCACACCAGTGCTGGATACCCTTATAGTG
CTTTGGGCATCAAGAAAAGAGACATCCTCGACCCAGTTACCAGAGACACCTCCAGGATGAAGTTATATAT
GGATAAGTATGGGTTGGACTTGCCTAATTCCACTTATGTAAAGGATGAGCTTAGTTCTCTAGATAAGATC
AGAAAAGGGGAGTCTCGCCTGATTGAGGCTAGCAGCTTAAATGATCCTGTCTACCCTAGATTGACTTTTG
GACACCTTTATGAAGTGTTTCACGCCAACCCAGGGACTGTAACAGGATCTGCAGTTGGGTGCAACCCTGA
TGTATTTTGGAGCAAGTTACCAATTTTGTTACCGGGTTCACTCTTTGCATTTGACTACTCAGGATATGAT
GCAAGCCTTAGTCCTGTGTGGTTCAGAGCTCTAGAGTTGGTTCTGAGAGAGATCGGTTACTCGGAGGAGG
CTGTGTCACTCATAGAAGGGATCAATCACACCCACCACGTGTACCGAAACAAGACATATTGTGTACTTGG
TGGAATGCCCTCAGGCTGCTCCGGTACTTCCATTTTCAATTCCATGATTAACAACATAATCATCAGAACC
CTCCTGATTAAAACATTCAAAGGTATAGACTTAGATGAGCTGAAAATGGTAGCTTATGGAGATGACGTGT
TGGCCAGCTACCCGTTTCCTATTGATTGCTTGGAATGGGGTAAAACAGGCAAAGAATATGGGCTGACTAT
GACTCCTGCTGATAAATCACCTTGTTTCAATGAGGTTACCTGGGAGAATGCAACCTTCTTAAAACGGGGT
TTTCTACCGGACCATCAGTTCCCTTTTCTGATCCATCCCACTATGCCCATGAGGGAAATCCATGAGTCCA
TCCGCTGGACCAAGGACGCGCGCAATACTCAAGATCATGTGCGCTCCCTTTGTCTCCTGGCATGGCATAA
TGGAAAAGAGGAGTATGAGAAATTTGTGAGTACAATTAGATCAGTCCCCATTGGAAGGGCTTTAGCAATT
CCAAATTTGGAGAACTTGAGAAGAAATTGGCTCGAGTTATTTTAAACTTACAGCTCAATGCTGAACCCCA
CCAGAAATCTGGTCGTGTCAATGACTGGTGGGGGTAAATTTGTTATAACCAGAATAGC
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