Details of Virus RNA
Full list of Host ncRNAs interacting with the Virus RNA
HncRNA | Host Species | HncRNA Detail | PMID | Source | Target Gene | Target Gene ID | Target Gene Source | PMID | Source |
---|---|---|---|---|---|---|---|---|---|
hsa-miR-146a-5p | Homo sapiens | HncRNA Info | 23988154 | ViRBase | WASF2 | . | miRSponge | 23435376 | miRSponge |
hsa-miR-29a-3p | Homo sapiens | HncRNA Info | 23988154 | ViRBase | ZFP36 | . | miRTarBase | 23401122 | miRTarBase |
hsa-miR-29a-5p | Homo sapiens | HncRNA Info | 23988154 | ViRBase | TAB1 | . | miRTarBase | 25549087 | miRTarBase |
hsa-miR-29b-3p | Homo sapiens | HncRNA Info | 23988154 | ViRBase | VEGFA | . | miRSponge | 18320040 | miRSponge |
hsa-miR-9-5p | Homo sapiens | HncRNA Info | 23988154 | ViRBase | ZC3H12A | . | miRTarBase | 25917063 | miRTarBase |
Host ncRNA GO Enrichment
Host ncRNA KEGG Pathway Enrichment
Pathways | Category | Adjusted P-value | Odds Ratio | Combined Score |
---|---|---|---|---|
Yersinia infection | KEGG Pathway | 0.013884 | 98.07407407 | 753.7245042 |
Kaposi sarcoma-associated herpesvirus infection | KEGG Pathway | 0.013884 | 69.12390925 | 484.0973122 |
Pathogenic Escherichia coli infection | KEGG Pathway | 0.013884 | 67.69230769 | 471.3141565 |
Shigellosis | KEGG Pathway | 0.016173944 | 53.96448087 | 351.969781 |
MAPK signaling pathway | KEGG Pathway | 0.018404401 | 44.98401826 | 277.5476678 |
Bladder cancer | KEGG Pathway | 0.058018632 | 124.71875 | 571.7716334 |
VEGF signaling pathway | KEGG Pathway | 0.058018632 | 85.93534483 | 362.846653 |
Renal cell carcinoma | KEGG Pathway | 0.058018632 | 73.26102941 | 297.9344326 |
Adherens junction | KEGG Pathway | 0.058018632 | 71.16071429 | 287.3738964 |
Pancreatic cancer | KEGG Pathway | 0.058018632 | 66.4 | 263.6627671 |
Leishmaniasis | KEGG Pathway | 0.058018632 | 65.52302632 | 259.3304857 |
Bacterial invasion of epithelial cells | KEGG Pathway | 0.058018632 | 65.52302632 | 259.3304857 |
Rheumatoid arthritis | KEGG Pathway | 0.058018632 | 54.08423913 | 203.9331744 |
Fc gamma R-mediated phagocytosis | KEGG Pathway | 0.058018632 | 51.8203125 | 193.2351734 |
Choline metabolism in cancer | KEGG Pathway | 0.058018632 | 51.28350515 | 190.7125852 |
AGE-RAGE signaling pathway in diabetic complications | KEGG Pathway | 0.058018632 | 50.24242424 | 185.836037 |
Toll-like receptor signaling pathway | KEGG Pathway | 0.058018632 | 48.2815534 | 176.708864 |
NF-kappa B signaling pathway | KEGG Pathway | 0.058018632 | 48.2815534 | 176.708864 |
HIF-1 signaling pathway | KEGG Pathway | 0.058018632 | 46.03472222 | 166.346898 |
TNF signaling pathway | KEGG Pathway | 0.058018632 | 44.78378378 | 160.6241286 |
Virus RNA Sequence Information
>NC_001549.1 Simian immunodeficiency virus, complete genome
TGGATGGGATATATTACTCTGAAAGAAGAGAAAAGATCCTGAATTTGTATGCCTTGAACGAGTGGGGAAT
AATAGATGATTGGCAAGCTTACTCACCAGGCCCGGGGATAAGGTACCCGAGAGTCTTTGGCTTCTGCTTT
AAGCTAGTCCCAGTGGACCTGCATGAGGAGGCACGCAACTGTGAGAGACACTGTCTGATGCATCCAGCAC
AGATGGGGGAAGATCCTGATGGAATAGATCATGGAGAAGTCTTGGTCTGGAAGTTTGACCCGAAGTTGGC
GGTGGAGTACCGCCCGGACATGTTTAAGGACATGCACGAACATGCAAAGCGCTAGTGTCAGCACTTTGCG
GTTGGGACTTTCCGCCAGGGACTTTCCACAGTGGGTGGATCGGAGGCGGTACAGGGGCGGTACTGGGAGT
GGCTTTCCCCTCAGAGCTGCATAAAAGCAGATGCTCGCTGGCTTGTAACTCAGTCTCTTACTAGGAGACC
AGCTAGAGCCTGGGTGTTCGCTGGTTAGCCTAACCCGGTTGGCCACCGGGGGTAAGGACTCCTTGGCTTC
ATATAGCTCAATAAACCTGCTCGCTTAGTCGCTATATTGGAGTCAAGTGCTCATTGCTGCGCCGAGCCTC
TAGAGGTGAACCTCTCTTACTGGGTTCTCCTGTACCCAGGTGGGAGAAACTCCAGCAGTGGCGCCCGAAC
AGGGACTTGAGAAGAGGCATCGGCACCGACCGCTGAGTTGCTGAGCGTCGGAGAGGGACGACTCAGGTAG
GGTGAGAGCCTACGAGTTTTTTGCTACCTAGTCAGCGAGAAAGGCTAGGCCGCGACAGGGGCGCGGGTCC
CATTAGTGGCAACCAACCCAGTTGGACGAAGGGTTGGTAGGGGACGGGTCGGAGCAATGGGCGGGGGTCA
CTCAGCACTGTCAGGGAGAAGCCTCGACACGTTCGAGAAGATTAGGCTACGTCCGAACGGGAAAAAGAAG
TACCAAATTAAACATTTAATATGGGCAGGAAAAGAAATGGAACGATTTGGGTTACATGAGAAACTTTTAG
AAACAAAAGAAGGCTGTCAAAAAATCATAGAAGTTTTAACCCCGTTGGAACCGACAGGCTCCGAGGGGCT
AAAAGCTCTGTTTAATTTGTGCTGCGTCATTTGGTGCATTCACGCAGAACAGAAAGTGAAAGACACAGAG
GAAGCTGTAGTAACAGTTAAGCAACACTACCATCTAGTGGACAAAAATGAGAAAGCAGCTAAAAAGAAAA
ATGAGACAACAGCGCCACCTGGTGGCGAATCAAGAAATTACCCAGTAGTAAATCAGAATAATGCCTGGGT
ACACCAGCCTTTGTCTCCGCGCACGTTAAATGCGTGGGTCAAATGCGTGGAGGAAAAAAGGTGGGGAGCA
GAAGTAGTCCCCATGTTCCAAGCACTCTCAGAGGGATGTCTCTCCTATGATGTAAATCAGATGCTCAATG
TAATAGGAGACCATCAGGGGGCATTACAAATTCTTAAGGAAGTCATTAATGAAGAAGCAGCAGAGTGGGA
CAGGACACACAGACCACCAGCTGGCCCGTTACCAGCAGGGCAGCTAAGAGACCCGACAGGGTCAGATATA
GCAGGAACTACCAGCTCAATTCAGGAACAAATAGAGTGGACCTTCAATGCCAATCCAAGAATAGACGTAG
GGGCACAATACAGAAAATGGGTTATTTTGGGCTTACAAAAGGTAGTGCAGATGTACAATCCCCAAAAGGT
CCTAGACATTCGACAGGGACCTAAAGAACCCTTCCAGGACTATGTAGACAGATTCTATAAAGCCCTGAGA
GCAGAACAAGCACCACAGGATGTTAAAAATTGGATGACACAAACTTTGCTTATCCAGAATGCCAATCCGG
ATTGTAAATTGATTCTGAAAGGATTGGGAATGAATCCAACCTTGGAGGAAATGCTAATAGCTTGCCAGGG
AGTAGGAGGGCCACAACATAAGGCTAAGCTAATGGTAGAAATGATGAGTAATGGACAGAATATGGTCCAA
GTGGGACCTCAGAAAAAGGGCCCCCGAGGGCCGCTAAAATGCTTTAATTGTGGCAAATTTGGACATATGC
AAAGGGAATGCAAGGCACCAAGACAGATCAAATGCTTTAAGTGCGGCAAAATTGGCCATATGGCAAAAGA
CTGCAAGAATGGACAGGCAAATTTTTTAGGGTATGGCCATTGGGGAGGAGCGAAACCAAGAAATTTTGTG
CAATACAGAGGAGACACAGTTGGTCTGGAACCAACAGCCCCCCCAATGGAAACAGCTTACGATCCAGCAA
AGAAGCTCCTCCAGCAGTATGCAGAGAAGGGACAGCGCCTGAGAGAGGAGAGAGAACAGACAAGGAAACA
GAAGGAGAAAGAAGTGGAGGATGTTTCCTTGAGCTCCCTCTTTGGAGGAGACCAATGAAACGAGTCATCA
TAGAAGGAACGCCAGTGCAAGCCTTGTTAGATACAGGAGCAGATGACACTATAATTCAAGAAAAGGACTT
GCACTTTCCCCCACATAAACCATGGCGTTCCAAGGTAGTAGGAGGTATAGGAGGAGGGATTCATGTCAAA
GAATATCAGGGGGTACAAGTACAATTGGAGGATAAAATCATCACCGGCTCAATTCTAATAGGAAGTACAC
CAATCAATATTATAGGAAGAAATATTTTAGCTCAGGCAGGCATGAAATTAGTTATGGGAGTTCTATCTAG
TCAGATTGAGGAAACAAAAGTACAACTAAAAGAAGGGAAAGATGGACCTAAATTGAAACAATGGCCCTTA
TCAAGAGAAAAAATTGAAGCTTTAACAGAAATATGCAAACAAATGGAAGAGGAGGGAAAATTATCTAGGA
TAGGAGGAGAAAATCCTTATAATACACCAGTGTTTGCCATAAAGAAAAAGGATAAAACACAATGGAGAAT
GCTTGTAGATTTCAGGGAACTAAACAAAGCTACTCAAGACTTTTTTGAGGTTCAGCTGGGAATTCCTCAC
CCAGCGGGCCTTCAGAAAAAGAAGCAAATCACAGTAATAGACATAGGGGATGCCTATTATTCAATACCAT
TATGCAAGGAATTCAGAAAATATACAGCATTTACCATCCCCTCAGTAAATAATACAGGGCCAGGGATAAG
GTATCAGTTCAATTGTCTGCCTCAGGGATGGAAAGGATCTCCTACAATTTTCCAGAATACGGCAGCAAAC
ATTTTAGAGGAGATCAAAAGGCACACTCCTGGGTTAGAAATTGTCCAATACATGGACGATTTGTGGTTGG
CGTCAGACCATGATGAGACTAGACATAATCAACAGGTAGACATAGTAAGAAAGATGCTGCTAGAAAAAGG
TCTAGAAACCCCAGACAAGAAAGTCCAAAGAGAACCGCCATGGGAATGGATGGGGTATAAATTGCATCCG
AATAAATGGACCATTAACAAAATAGAATTACCCCCCTTAGAAGGAGAATGGACAGTAAACAAAATACAGA
AGGTAGTAGGAGTTCTAAATTGGGCAAGTCAAATTTATCCAGGAATTAAAACCAAACATACCTGTGCCAT
GTTGAGAGGGAAAAAGAACCTCCTAGAAGAAATAGTATGGACAGAAGAGGCAGAGGCAGAATATAAGAAC
AATCAAGGGATAGTGCAGGAAACACAAGAAGGAACATACTATGACCCTCTCAAAGAATTAATAGCAACAG
TTCAAAAGCAAGGAGAAGGGCAATGGACATACCAATTCACCCAAGAAGGGGCAGTATTAAAGGTGGGAAG
ATATGCCAAGCAAAGAGAAACTCATACTAATGATCTAAGGACTCTAGCACACCTTGTCCAAAAAATCTGT
AAGGAAGCACTTACCATTTGGGGAAGACTTCCACGAGTACAACTCCCAGTAGACAAGAAAACATGGGATA
TGTGGTGGCAGGACTATTGGCAAGTATCCTGGATACCAGAATGGGAGTTTGTTAGCACACCACTCCTAGT
AAAACTGTGGTATTCCTTAGTAAAAGAACCAATCAAAGGAGAAGATGTTTATTATGTGGATGGGGCAGCA
TCCAAAGTGACCAAATTAGGTAAGGCAGGATATCTGTCAGAGAGAGGAAAAAGTAGAATTAGGGAATTAG
AAAACACCACTAACCAACAAGCAGAATTAACAGCAGTTAAGATGGCATTGGAGGACAGTGGAGAAAATGT
AAATATAGTCACAGATTCTCAATATGTAATGAACATCTTGACAGCATGTCCACAGGAAAGTAACTCACCC
TTAGTGGAACAGATAATACAAGCCCTAATGAAAAAGAGGCAGGTCTACTTACAATGGGTACCAGCTCATA
AGGGGATAGGAGGCAATACAGAAATAGATAAATTAGTAAGCAAAGGAATAAGACAGATCCTCTTCTTAGA
TAGAATAGAAGAAGCACAAGATGACCATGCAAAGTACCATAACAATTGGAGAAGTATGGTACAGGAATTT
GGATTACCTAATATAGTAGCAAAAGAGATAGTAGCGGCATGTCCCAAATGCCAAATAAGAGGAGAACCTA
AGCATGGACAGGTAGACGCCTCCATTGAAACTTGGCAGATGGACTGCACCCATTTAGAAGGAAAAGTTAT
AATAGTAGCAGTACATGTAGCCAGTGGATTCATAGAAGCAGAGGTGATCCCAAGAGAAACTGGGAAGGAG
ACAGCACACTTTCTGCTGAAACTGTTAGCAAGATGGCCAGTGAAACATCTACACACTGATAATGGCCCAA
ACTTTACCTCTCAGAATGTGGCAGCGGTGTGCTGGTGGGGTAATATAGAGCACACCACTGGAATACCTTA
TAACCCACAGTCACAGGGTAGTGTAGAAAGCATGAACAGACAGCTCAAGGAAATCATCTCTCAAATAAGA
GATGATTGTGAGAGATTGGAGACAGCAGTGCAAATGGCTACGCATATCCACAATTTTAAAAGAAAGGGAG
GAATAGGGGGTATCTCTAGTGCAGAAAGATTGGTTAATATGCTAACAACACAACTAGAACTAAATACTCT
ACAAAACCAAATCCAAAAAATTTTGAATTTTAAGGTCTACTACAGAGAAGGTAGAGATCCAGTGTGGAAA
GGACCAGCGCGACTCATCTGGAAAGGAGAAGGCGCGGTGGTAATTAAAGAGGGGGAAGACATCAAGGTAG
TCCCCAGGAGAAAGGCTAAGATTATCAAAGATTATGGAGAGAGAAAAACAATGGATAGTGAGGGTAGTAT
GGAGGGTGTCAGAGAGGCAAATAAGCAGATGGAGGGGGATAGTGACTTACAAGATCAGGAATAAACAATT
GCCTTGGGAATACAGACATCATTGGCAGGTGCAATGGCAGTTTTGGACCTACAGCCAGTTCATTATCCCC
TTATCAAAAGATGATTACATAGAAGTGAATATTTATCACAACCTCACCCCAGAAAGAGGATGGCTCTCAA
GTCATGGAGTAGGGTTATCCTATTACCATCAAAAGGGATATAAGACAGAAGTAGATCCAGGAACAGCAGA
CAGAATGATACACCTATATTATTTTAACTGTTTTACAGATAGAGCCATCCAACAGGCTATCAGAGGGGAG
AAGTATACGTGGTGCACATTCAAGGAAGGACATAAAGGTCAGGTACAATCACTGCAACTTTTGGCACTAG
TTGCATATACAAATGGCATCAGGAAGAGATCCAAGAGAACCTTTACCAGGATGGCTGGAAATCTGGGATC
TAGACAGGGAGCCATGGGACGAATGGCTACAAGACATGCTCAGGGATCTAAACGAAGAAGCCAGAAGGCA
CTTTGGAATGAACATGCTAATCCGAGTATGGAATTACTGTGTAGAGGAGGGAAGGAGACATAATACCCCA
TGGAATGAGATAGGCTACAAGTACTATAGAATTGTTCAAAAGTCTATGTTTGTACATTTCAGATGTGGTT
GTAGAAGGAGAGGACCTTTTTCCCCTTACGAAGAGAGGAGAAATGGACAAGGAGGAGGAGCCCCACCCCC
TCCTCCAGGACTTGCATAGGCCATTACAACCATGTACTAATAAATGCTATTGCAAAAAATGCTGTTATCA
CTGTGAGCTTTGCTTCCTGCAGAAGGGCTTAGGAGTGCGTTATCATGTCTCTAGGAAAAGAAGAAAAACA
AGCACTCAAGATAATCAAGACCCTATACGGCAGCAGTAAGTATGGGGAGATTGCTTATAAAAATACTAAT
AATAGCAATAGGGATAAGTATAGGAATAGGTAACCTGTATGTGACAGTGTTTTATGGAATCCCAGTATGG
AAAAATTCAACAGTTCAGGCATTTTGCATGACGCCCAATACCAATATGTGGGCAACCACCAACTGCATAC
CAGATGATCATGATAATACAGAGGTGCCTCTAAACATTACAGAAGCTTTCGAGGCTTGGGATAATCCGCT
GGTAAAACAAGCAGAGAGTAATATACATCTACTCTTTGAACAAACGATGAGGCCTTGTGTTAAGCTCTCC
CCCATATGTATTAAAATGTCCTGTGTAGAGCTGAATGGTACAGCCACGACAAAGGCCACCACTACTGCAA
CTACAACAATGACTACCCCCTGTCAGAATTGCAGTACAGAGCAGATAGAAGGAGAAATGGCAGAGGAACC
AGCATCCAACTGCACTTTTGCAATTGCAGGATATCAAAGAGATGTAAAAAAGAATTATAGCATGACCTGG
TATGATCAGGAGTTAGTCTGCAATAATAAAACAGGAAGTGAAAAGGGAAGTAAGGATTGTTACATGATAC
ATTGTAATGATTCAGTGATAAAAGAAGCTTGTGATAAAACATATTGGGATACTTTAAGAGTAAGATACTG
TGCACCAGCAGGGTATGCTTTGCTAAAATGTAATGATAAGGATTATAGAGGCTTTGCTCCAAAGTGCAAG
AATGTTTCAGTAGTGCATTGTACTAGATTAATCAATACTACTATAACTACAGGGATAGGATTAAATGGTA
GTAGATCAGAAAATAGAACAGAGATATGGCAGAAAGGAGGAAATGATAATGATACAGTTATAATAAAGTT
GAATAAGTTTTACAACTTGACAGTGAGATGCCGAAGACCTGGTAATAAAACAGTGTTGCCAGTAACAATC
ATGGCAGGGTTAGTATTTCACTCTCAGAAATATAATACCAGGTTAAAACAAGCGTGGTGCCACTTCCAAG
GAGATTGGAAAGGGGCATGGAAAGAAGTCAGAGAAGAAGTAAAGAAAGTGAAAAATCTTACAGAAGTAAG
CATAGAAAATATACATCTGAGAAGGATATGGGGAGATCCAGAATCAGCGAATTTTTGGTTCAATTGTCAA
GGTGAATTTTTCTATTGTAAGATGGACTGGTTTATCAATTATCTAAACAATCGAACAGAAGATGCAGAAG
GTACTAATAGGACCTGTGACAAAGGGAAGCCAGGACCAGGACCATGTGTTCAGAGAACTTATGTTGCCTG
CCATATACGACAAGTAGTAAATGATTGGTACACTGTCTCTAAAAAGGTATATGCTCCACCAAGGGAAGGT
CATTTGGAGTGTAACTCATCAGTCACGGCACTATACGTGGCAATAGATTATAACAACAAGTCTGGCCCAA
TAAATGTGACCCTAAGTCCTCAGGTACGCAGCATATGGGCGTACGAACTGGGAGACTATAAATTAGTAGA
GATAACACCAATTGGCTTTGCTCCTACAGATGTAAGAAGATATACTGGCCCCACAAGAGAAAAAAGGGTG
CCATTCGTGCTAGGGTTTCTAGGCTTCTTGGGAGCTGCTGGAACTGCAATGGGCGCAGCGGCAACAACGC
TGACAGTCCAGTCTCGGCATTTGCTTGCTGGGATATTGCAGCAGCAGAAGAACTTGCTGGCGGCTGTGGA
ACAGCAACAACAGTTGTTGAAGCTGACCATTTGGGGTGTGAAAAACCTCAATGCCCGCGTCACAGCTCTC
GAGAAGTACCTAGAGGATCAGGCACGGCTAAATTCATGGGGATGTGCGTGGAAACAAGTATGTCACACCA
CAGTGCCATGGAAGTATAATAACACTCCTAAGTGGGACAATATGACTTGGTTGGAGTGGGAGAGACAAAT
TAATGCCTTGGAAGGCAACATAACTCAACTATTGGAAGAAGCACAAAATCAGGAATCAAAGAATCTGGAT
CTGTACCAGAAATTGGATGATTGGTCAGGGTTCTGGTCATGGTTCTCACTGTCAACTTGGTTAGGCTATG
TTAAAATAGGATTTTTAGTGATAGTGATTATTCTAGGATTAAGATTTGCATGGGTATTATGGGGATGTAT
CAGAAATATTAGGCAGGGATATAATCCTCTCCCCCAGATCCATATCCACAGTTCAGCGGAACGGCCAGAC
AACGGAGGAGGGCAAGACAGAGGTGGAGAAAGCAGCAGCAGCAAATTGATAAGATTGCAGGAAGAGTCCT
CAACACCTTCGAGGATCAACAACTGGTGGCTCAACTTCAAGAGCTGCAGCTTGAGAATAAGGACTTGGTG
TTACAACATCTGCCTGACCCTCCTCATATTCATCAGGACAGCAGTGGGATACCTGCAGTATGGGCTCCAG
CAACTCCAAGAGGCAGCAACAGGGCTTGCTCAAGCTCTGGCGAGGGCTGCGAGGGAAGCCTGGGGCAGAC
TGGGTGCTATTGTCCGATCCGCTTATCGGGCAGTCATCAACAGTCCAAGAAGAGTGCGGCAAGGCCTTGA
AAAAGTCCTGGGGTAAAGGTAAAATGACTCCAGACGGCCGCCGCCTGCAAGAAGGAGACACCTTTGATGA
GTGGGATGATGATGAAGAAGAAGTAGGCTTCCCTGTGCAACCTCGAGTCCCCTTAAGACAGATGACCTAT
AAATTAGCAGTGGACTTTTCCCACTTTTTAAAATCAAAGGGGGGACTGGATGGGATATATTACTCTGAAA
GAAGAGAAAAGATCCTGAATTTGTATGCCTTGAACGAGTGGGGAATAATAGATGATTGGCAAGCTTACTC
ACCAGGCCCGGGGATAAGGTACCCGAGAGTCTTTGGCTTCTGCTTTAAGCTAGTCCCAGTGGACCTGCAT
GAGGAGGCACGCAACTGTGAGAGACACTGTCTGATGCATCCAGCACAGATGGGGGAAGATCCTGATGGAA
TAGATCATGGAGAAGTCTTGGTCTGGAAGTTTGACCCGAAGTTGGCGGTGGAGTACCGCCCGGACATGTT
TAAGGACATGCACGAACATGCAAAGCGCTAGTGTCAGCACTTTGCGGTTGGGACTTTCCGCCAGGGACTT
TCCACAGTGGGTGGATCGGAGGCGGTACAGGGGCGGTACTGGGAGTGGCTTTCCCCTCAGAGCTGCATAA
AAGCAGATGCTCGCTGGCTTGTAACTCAGTCTCTTACTAGGAGACCAGCTAGAGCCTGGGTGTTCGCTGG
TTAGCCTAACCCGGTTGGCCACCGGGGGTAAGGACTCCTTGGCTTCATATAGCTCAATAAACCTGCTCGC
TTAGTCGCTATATTGGAGTCAAGTGCTCATTGCTGCGCCGAGCCTCTAGAGGTGAACCTCTCTTACTGGG
TTCTCCTGTACCCAGGTGGGAGAAACTCCAGCA
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