Host Protein General Information

  Protein Name
Tropomyosin alpha-1 chain
  Gene Name
TPM1
  Host Species
Homo sapiens
  Uniprot Entry Name
TPM1_HUMAN
  Protein Families
Tropomyosin family
  Subcellular Location
Cytoplasm; cytoskeleton
  External Link
NCBI Gene ID
7168
Uniprot ID
P09493
Ensembl ID
ENSG00000047410
HGNC ID
12010
  Related KEGG Pathway
Cardiac muscle contraction hsa04260            Pathway Map 
Adrenergic signaling in cardiomyocytes hsa04261            Pathway Map 
Motor proteins hsa04814            Pathway Map 
MicroRNAs in cancer hsa05206            Pathway Map 
Hypertrophic cardiomyopathy hsa05410            Pathway Map 
Dilated cardiomyopathy hsa05414            Pathway Map 
  3D Structure
PDB ID: 3MUD 
FASTA   Download
  2D PNG Download  
PDB File Download

Full List of Virus RNA Interacting with This Protien

Virus Name Binding Region RNA Info Detection Method Infection Cell Cell ID Cell Originated Tissue Infection Time Interaction Score 1 Interaction Score 2
Encephalomyocarditis virus 5'UTR - 3'UTR RNA Info Comprehensive identification of RNA-binding proteins by mass spectrometry (ChIRP-MS) HuH-7.5 Cells (Human hepatocellular carcinoma cell) . Liver . Z-score = -6.91156507 FZR = 3.40328E-09
Influenza A virus 5'UTR - 3'UTR RNA Info Comprehensive identification of RNA-binding proteins by mass spectrometry (ChIRP-MS) HuH-7.5 Cells (Human hepatocellular carcinoma cell) . Liver . Z-score = 0.576552995 FZR = 1
Hepatitis E virus 3'UTR RNA Info RNA-protein interaction detection (RaPID) assay coupled to liquid chromatography with tandem mass spectrometry (LC-MS/MS) HEK293 Cells (Human embryonic kidney cell); Mesc cells (Embryonic stem cell) . Kidney . . .

Protein Sequence Information

MDAIKKKMQMLKLDKENALDRAEQAEADKKAAEDRSKQLEDELVSLQKKLKGTEDELDKYSEALKDAQEKLELAEKKATDAEADVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIESRAQKDEEKMEIQEIQLKEAKHIAEDADRKYEEVARKLVIIESDLERAEERAELSEGKCAELEEELKTVTNNLKSLEAQAEKYSQKEDRYEEEIKVLSDKLKEAETRAEFAERSVTKLEKSIDDLEDELYAQKLKYKAISEELDHALNDMTSI
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