Virus General Information

  Virus Name
Influenza A virus (IAV)
  Strains
(strain California/7/2004 (H3N2))
  Lineage
Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; Insthoviricetes; Articulavirales; Orthomyxoviridae; Alphainfluenzavirus; Influenza A virus; H3N2 subtype
  Virus Molecule Type
ssRNA(-)
  Sequence ID
NC_002023
  Genome Type
Segmented
  Related Host Aves Anas platyrhynchos Gallus gallus Homo Homo sapiens Canis lupus familiaris Felis catus Panthera pardus Panthera tigris Sus scrofa
  Related Disease H5N1 flu Influenza
  External Link
 Taxon ID 11320
 Virus-Host DB https://www.genome.jp/virushostdb/view/?mode=view&search_text=Influenza+A+virus
 KEGG GENOME ID T40037
 KEGG BRITE ID NC_007366 NC_007367 NC_007368 NC_007369 NC_007370 NC_007371 NC_007372 NC_007373

Virus Virion and Genome Information

    Virion Information
Enveloped. Usually rounded but can be filamentous The virions are 80-120 nm in diameter.
    GENOME Information
Segmented ssRNA(-) linear genome, encapsidated by nucleoprotein (NP). Contains 8 segments coding for 12-14 proteins depending on strains. Segments size range from 890 to 2,341nt. Genome total size is 13.5Kb.

Virus-RNA -- Host-Protein Interaction

RNA Binding Site RNA Detail Protein Name Host Species Uniprot ID Protein Detail
5'UTR - 3'UTR RNA Info 14-3-3 protein zeta/delta Homo sapiens P63104 Pro Info
5'UTR - 3'UTR RNA Info 60S ribosomal protein L15 Homo sapiens P61313 Pro Info
5'UTR - 3'UTR RNA Info A-kinase anchor protein 12 Homo sapiens Q02952 Pro Info
5'UTR - 3'UTR RNA Info Alpha-ETF Homo sapiens P13804 Pro Info
5'UTR - 3'UTR RNA Info Anion exchange protein 2 Homo sapiens P04920 Pro Info
5'UTR - 3'UTR RNA Info Ankyrin repeat domain-containing protein 17 Homo sapiens O75179 Pro Info
5'UTR - 3'UTR RNA Info AP-1 complex subunit gamma-1 Homo sapiens O43747 Pro Info
5'UTR - 3'UTR RNA Info ARC205 Homo sapiens Q15648 Pro Info
5'UTR - 3'UTR RNA Info Calpain-2 catalytic subunit Homo sapiens P17655 Pro Info
5'UTR - 3'UTR RNA Info Cyclin-G-associated kinase Homo sapiens O14976 Pro Info
5'UTR - 3'UTR RNA Info Dedicator of cytokinesis protein 7 Homo sapiens Q96N67 Pro Info
5'UTR - 3'UTR RNA Info Delta-1-pyrroline-5-carboxylate synthase Homo sapiens P54886 Pro Info
5'UTR - 3'UTR RNA Info Desmoyokin Homo sapiens Q09666 Pro Info
5'UTR - 3'UTR RNA Info Diphosphoinositol pentakisphosphate kinase 2 Homo sapiens O43314 Pro Info
5'UTR - 3'UTR RNA Info Galectin-7 Homo sapiens P47929 Pro Info
5'UTR - 3'UTR RNA Info Glutathione reductase Homo sapiens P00390 Pro Info
5'UTR - 3'UTR RNA Info Glycinamide ribonucleotide synthetase Homo sapiens P22102 Pro Info
5'UTR - 3'UTR RNA Info Host cell factor 1 Homo sapiens P51610 Pro Info
5'UTR - 3'UTR RNA Info HPK/GCK-like kinase HGK Homo sapiens O95819 Pro Info
5'UTR - 3'UTR RNA Info Long-chain fatty acid transport protein 2 Homo sapiens O14975 Pro Info

Virus Sequence Information

>NC_002023.1 Influenza A virus (A/Puerto Rico/8/1934(H1N1)) segment 1, complete sequence AGCGAAAGCAGGTCAATTATATTCAATATGGAAAGAATAAAAGAACTAAGAAATCTAATGTCGCAGTCTC GCACCCGCGAGATACTCACAAAAACCACCGTGGACCATATGGCCATAATCAAGAAGTACACATCAGGAAG ACAGGAGAAGAACCCAGCACTTAGGATGAAATGGATGATGGCAATGAAATATCCAATTACAGCAGACAAG AGGATAACGGAAATGATTCCTGAGAGAAATGAGCAAGGACAAACTTTATGGAGTAAAATGAATGATGCCG GATCAGACCGAGTGATGGTATCACCTCTGGCTGTGACATGGTGGAATAGGAATGGACCAATGACAAATAC AGTTCATTATCCAAAAATCTACAAAACTTATTTTGAAAGAGTCGAAAGGCTAAAGCATGGAACCTTTGGC CCTGTCCATTTTAGAAACCAAGTCAAAATACGTCGGAGAGTTGACATAAATCCTGGTCATGCAGATCTCA GTGCCAAGGAGGCACAGGATGTAATCATGGAAGTTGTTTTCCCTAACGAAGTGGGAGCCAGGATACTAAC ATCGGAATCGCAACTAACGATAACCAAAGAGAAGAAAGAAGAACTCCAGGATTGCAAAATTTCTCCTTTG ATGGTTGCATACATGTTGGAGAGAGAACTGGTCCGCAAAACGAGATTCCTCCCAGTGGCTGGTGGAACAA GCAGTGTGTACATTGAAGTGTTGCATTTGACTCAAGGAACATGCTGGGAACAGATGTATACTCCAGGAGG GGAAGTGAAGAATGATGATGTTGATCAAAGCTTGATTATTGCTGCTAGGAACATAGTGAGAAGAGCTGCA GTATCAGCAGACCCACTAGCATCTTTATTGGAGATGTGCCACAGCACACAGATTGGTGGAATTAGGATGG TAGACATCCTTAAGCAGAACCCAACAGAAGAGCAAGCCGTGGGTATATGCAAGGCTGCAATGGGACTGAG AATTAGCTCATCCTTCAGTTTTGGTGGATTCACATTTAAGAGAACAAGCGGATCATCAGTCAAGAGAGAG GAAGAGGTGCTTACGGGCAATCTTCAAACATTGAAGATAAGAGTGCATGAGGGATATGAAGAGTTCACAA TGGTTGGGAGAAGAGCAACAGCCATACTCAGAAAAGCAACCAGGAGATTGATTCAGCTGATAGTGAGTGG GAGAGACGAACAGTCGATTGCCGAAGCAATAATTGTGGCCATGGTATTTTCACAAGAGGATTGTATGATA AAAGCAGTTAGAGGTGATCTGAATTTCGTCAATAGGGCGAATCAGCGACTGAATCCTATGCATCAACTTT TAAGACATTTTCAGAAGGATGCGAAAGTGCTTTTTCAAAATTGGGGAGTTGAACCTATCGACAATGTGAT GGGAATGATTGGGATATTGCCCGACATGACTCCAAGCATCGAGATGTCAATGAGAGGAGTGAGAATCAGC AAAATGGGTGTAGATGAGTACTCCAGCACGGAGAGGGTAGTGGTGAGCATTGACCGGTTCTTGAGAGTCC GGGACCAACGAGGAAATGTACTACTGTCTCCCGAGGAGGTCAGTGAAACACAGGGAACAGAGAAACTGAC AATAACTTACTCATCGTCAATGATGTGGGAGATTAATGGTCCTGAATCAGTGTTGGTCAATACCTATCAA TGGATCATCAGAAACTGGGAAACTGTTAAAATTCAGTGGTCCCAGAACCCTACAATGCTATACAATAAAA TGGAATTTGAACCATTTCAGTCTTTAGTACCTAAGGCCATTAGAGGCCAATACAGTGGGTTTGTGAGAAC TCTGTTCCAACAAATGAGGGATGTGCTTGGGACATTTGATACCGCACAGATAATAAAACTTCTTCCCTTC GCAGCCGCTCCACCAAAGCAAAGTAGAATGCAGTTCTCCTCATTTACTGTGAATGTGAGGGGATCAGGAA TGAGAATACTTGTAAGGGGCAATTCTCCTGTATTCAACTACAACAAGGCCACGAAGAGACTCACAGTTCT CGGAAAGGATGCTGGCACTTTAACCGAAGACCCAGATGAAGGCACAGCTGGAGTGGAGTCCGCTGTTCTG AGGGGATTCCTCATTCTGGGCAAAGAAGACAGGAGATATGGGCCAGCATTAAGCATCAATGAACTGAGCA ACCTTGCGAAAGGAGAGAAGGCTAATGTGCTAATTGGGCAAGGAGACGTGGTGTTGGTAATGAAACGAAA ACGGGACTCTAGCATACTTACTGACAGCCAGACAGCGACCAAAAGAATTCGGATGGCCATCAATTAGTGT CGAATAGTTTAAAAACGACCTTGTTTCTACT
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