Virus General Information

  Virus Name
Influenza A virus (IAV)
  Lineage
Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; Insthoviricetes; Articulavirales; Orthomyxoviridae; Alphainfluenzavirus; Influenza A virus; H3N2 subtype
  Virus Molecule Type
ssRNA(-)
  Sequence ID
NC_002023
  Genome Type
Segmented
  Related Host Homo sapiens
  Related Disease H5N1 flu Influenza
  External Link
 Taxon ID 11320
 Virus-Host DB https://www.genome.jp/virushostdb/view/?mode=view&search_text=Influenza+A+virus

Virus Virion and Genome Information

    Virion Information
Enveloped. Usually rounded but can be filamentous The virions are 80-120 nm in diameter.
    GENOME Information
Segmented ssRNA(-) linear genome, encapsidated by nucleoprotein (NP). Contains 8 segments coding for 12-14 proteins depending on strains. Segments size range from 890 to 2,341nt. Genome total size is 13.5Kb.

Virus-RNA -- Host-Protein Interaction

RNA Binding Site RNA Detail Protein Name Host Species Uniprot ID Protein Detail
5'UTR - 3'UTR RNA Info 100 kDa coactivator Homo sapiens Q7KZF4 Pro Info
5'UTR - 3'UTR RNA Info 13 kDa differentiation-associated protein Homo sapiens Q9UI09 Pro Info
5'UTR - 3'UTR RNA Info 14 kDa phosphohistidine phosphatase Homo sapiens Q9NRX4 Pro Info
5'UTR - 3'UTR RNA Info 14-3-3 protein beta/alpha Homo sapiens P31946 Pro Info
5'UTR - 3'UTR RNA Info 14-3-3 protein epsilon Homo sapiens P62258 Pro Info
5'UTR - 3'UTR RNA Info 14-3-3 protein eta Homo sapiens Q04917 Pro Info
5'UTR - 3'UTR RNA Info 14-3-3 protein gamma Homo sapiens P61981 Pro Info
5'UTR - 3'UTR RNA Info 14-3-3 protein sigma Homo sapiens P31947 Pro Info
5'UTR - 3'UTR RNA Info 14-3-3 protein theta Homo sapiens P27348 Pro Info
5'UTR - 3'UTR RNA Info 14-3-3 protein zeta/delta Homo sapiens P63104 Pro Info
5'UTR - 3'UTR RNA Info 140 kDa Ser/Arg-rich domain protein Homo sapiens O15042 Pro Info
5'UTR - 3'UTR RNA Info 17-beta-hydroxysteroid dehydrogenase type 2 Homo sapiens P37059 Pro Info
5'UTR - 3'UTR RNA Info 2',5'-phosphodiesterase 12 Homo sapiens Q6L8Q7 Pro Info
5'UTR - 3'UTR RNA Info 2-oxoisovalerate dehydrogenase subunit beta Homo sapiens P21953 Pro Info
5'UTR - 3'UTR RNA Info 26S proteasome non-ATPase regulatory subunit 11 Homo sapiens O00231 Pro Info
5'UTR - 3'UTR RNA Info 26S proteasome non-ATPase regulatory subunit 12 Homo sapiens O00232 Pro Info
5'UTR - 3'UTR RNA Info 26S proteasome non-ATPase regulatory subunit 13 Homo sapiens Q9UNM6 Pro Info
5'UTR - 3'UTR RNA Info 26S proteasome non-ATPase regulatory subunit 14 Homo sapiens O00487 Pro Info
5'UTR - 3'UTR RNA Info 26S proteasome non-ATPase regulatory subunit 2 Homo sapiens Q13200 Pro Info
5'UTR - 3'UTR RNA Info 26S proteasome non-ATPase regulatory subunit 3 Homo sapiens O43242 Pro Info

Virus Sequence Information

>NC_002023.1 Influenza A virus (A/Puerto Rico/8/1934(H1N1)) segment 1, complete sequence AGCGAAAGCAGGTCAATTATATTCAATATGGAAAGAATAAAAGAACTAAGAAATCTAATGTCGCAGTCTC GCACCCGCGAGATACTCACAAAAACCACCGTGGACCATATGGCCATAATCAAGAAGTACACATCAGGAAG ACAGGAGAAGAACCCAGCACTTAGGATGAAATGGATGATGGCAATGAAATATCCAATTACAGCAGACAAG AGGATAACGGAAATGATTCCTGAGAGAAATGAGCAAGGACAAACTTTATGGAGTAAAATGAATGATGCCG GATCAGACCGAGTGATGGTATCACCTCTGGCTGTGACATGGTGGAATAGGAATGGACCAATGACAAATAC AGTTCATTATCCAAAAATCTACAAAACTTATTTTGAAAGAGTCGAAAGGCTAAAGCATGGAACCTTTGGC CCTGTCCATTTTAGAAACCAAGTCAAAATACGTCGGAGAGTTGACATAAATCCTGGTCATGCAGATCTCA GTGCCAAGGAGGCACAGGATGTAATCATGGAAGTTGTTTTCCCTAACGAAGTGGGAGCCAGGATACTAAC ATCGGAATCGCAACTAACGATAACCAAAGAGAAGAAAGAAGAACTCCAGGATTGCAAAATTTCTCCTTTG ATGGTTGCATACATGTTGGAGAGAGAACTGGTCCGCAAAACGAGATTCCTCCCAGTGGCTGGTGGAACAA GCAGTGTGTACATTGAAGTGTTGCATTTGACTCAAGGAACATGCTGGGAACAGATGTATACTCCAGGAGG GGAAGTGAAGAATGATGATGTTGATCAAAGCTTGATTATTGCTGCTAGGAACATAGTGAGAAGAGCTGCA GTATCAGCAGACCCACTAGCATCTTTATTGGAGATGTGCCACAGCACACAGATTGGTGGAATTAGGATGG TAGACATCCTTAAGCAGAACCCAACAGAAGAGCAAGCCGTGGGTATATGCAAGGCTGCAATGGGACTGAG AATTAGCTCATCCTTCAGTTTTGGTGGATTCACATTTAAGAGAACAAGCGGATCATCAGTCAAGAGAGAG GAAGAGGTGCTTACGGGCAATCTTCAAACATTGAAGATAAGAGTGCATGAGGGATATGAAGAGTTCACAA TGGTTGGGAGAAGAGCAACAGCCATACTCAGAAAAGCAACCAGGAGATTGATTCAGCTGATAGTGAGTGG GAGAGACGAACAGTCGATTGCCGAAGCAATAATTGTGGCCATGGTATTTTCACAAGAGGATTGTATGATA AAAGCAGTTAGAGGTGATCTGAATTTCGTCAATAGGGCGAATCAGCGACTGAATCCTATGCATCAACTTT TAAGACATTTTCAGAAGGATGCGAAAGTGCTTTTTCAAAATTGGGGAGTTGAACCTATCGACAATGTGAT GGGAATGATTGGGATATTGCCCGACATGACTCCAAGCATCGAGATGTCAATGAGAGGAGTGAGAATCAGC AAAATGGGTGTAGATGAGTACTCCAGCACGGAGAGGGTAGTGGTGAGCATTGACCGGTTCTTGAGAGTCC GGGACCAACGAGGAAATGTACTACTGTCTCCCGAGGAGGTCAGTGAAACACAGGGAACAGAGAAACTGAC AATAACTTACTCATCGTCAATGATGTGGGAGATTAATGGTCCTGAATCAGTGTTGGTCAATACCTATCAA TGGATCATCAGAAACTGGGAAACTGTTAAAATTCAGTGGTCCCAGAACCCTACAATGCTATACAATAAAA TGGAATTTGAACCATTTCAGTCTTTAGTACCTAAGGCCATTAGAGGCCAATACAGTGGGTTTGTGAGAAC TCTGTTCCAACAAATGAGGGATGTGCTTGGGACATTTGATACCGCACAGATAATAAAACTTCTTCCCTTC GCAGCCGCTCCACCAAAGCAAAGTAGAATGCAGTTCTCCTCATTTACTGTGAATGTGAGGGGATCAGGAA TGAGAATACTTGTAAGGGGCAATTCTCCTGTATTCAACTACAACAAGGCCACGAAGAGACTCACAGTTCT CGGAAAGGATGCTGGCACTTTAACCGAAGACCCAGATGAAGGCACAGCTGGAGTGGAGTCCGCTGTTCTG AGGGGATTCCTCATTCTGGGCAAAGAAGACAGGAGATATGGGCCAGCATTAAGCATCAATGAACTGAGCA ACCTTGCGAAAGGAGAGAAGGCTAATGTGCTAATTGGGCAAGGAGACGTGGTGTTGGTAATGAAACGAAA ACGGGACTCTAGCATACTTACTGACAGCCAGACAGCGACCAAAAGAATTCGGATGGCCATCAATTAGTGT CGAATAGTTTAAAAACGACCTTGTTTCTACT
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