Virus General Information

  Virus Name
Coxsackievirus B3 (CVB3)
  Lineage
Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; Picornaviridae; Ensavirinae; Enterovirus; Enterovirus B
  Virus Molecule Type
ssRNA(+)
  Sequence ID
M16572.1
  Genome Type
Non-segmented
  Related Host Homo sapiens
  External Link
 Taxon ID 12072
 Virus-Host DB https://www.genome.jp/virushostdb/12072
 KEGG BRITE ID NC_038307

Virus Virion and Genome Information

    Virion Information
Non-enveloped, spherical, about 30 nm in diameter, T=pseudo3 icosahedral capsid surrounding the naked RNA genome. The capsid consists of a densely-packed icosahedral arrangement of 60 protomers, each consisting of 4 polypeptides, VP1, VP2, VP3 and VP4. VP4 is located on the internal side of the capsid.
    GENOME Information
Monopartite, linear ssRNA(+) genome of 7.2-8.5 kb, polyadenylated, composed of a single ORF encoding a polyprotein. Viral genomic RNA has a viral protein (VPg) at its 5' end instead of a methylated nucleotide cap structure. The long UTR at the 5' end contains a type I internal ribosome entry site (IRES). The P1 region encodes the structural polypeptides. The P2 and P3 regions encode the nonstructural proteins associated with replication.

Virus-RNA -- Host-Protein Interaction

RNA Binding Site RNA Detail Protein Name Host Species Uniprot ID Protein Detail
3'UTR RNA Info Heterogeneous nuclear ribonucleoprotein D0 Homo sapiens Q14103 Pro Info

Virus-RNA -- Host-ncRNA Interaction

RNA Binding Site RNA Detail HncRNA Name Host Species External Link HncRNA Detail
5'UTR - 3'UTR RNA Info hsa-miR-10a-3p Homo sapiens miRBase HncRNA Info
VP2 RNA Info hsa-miR-342-5p Homo sapiens miRBase HncRNA Info

Virus-ncRNA -- Host-ncRNA Interaction

VncRNA Name VncRNA Detail HncRNA Name Host Species HncRNA Detail External Link
lncRNA004787 VncRNA Info hsa-miR-107 Homo sapiens HncRNA Info

Virus Sequence Information

>M16572.1 Coxsackievirus B3, complete genome TTAAAACAGCCTGTGGGTTGATCCCACCCACAGGCCCATTGGGCGCTAGCACTCTGGTATCACGGTACCT TTGTGCGCCTGTTTTATACCCCCTCCCCCAACTGTAACTTAGAAGTAACACACACCGATCAACAGTCAGC GTGGCACACCAGCCACGTTTTGATCAAGCACTTCTGTTACCCCGGACTGAGTATCAATAGACTGCTCACG CGGTTGAAGGAGAAAGCGTTCGTTATCCGGCCAACTACTTCGAAAAACCTAGTAACACCGTGAAGTTGCA GAGTGTTTCGCTCAGCACTACCCCAGTGTAGATCAGGTCGATGAGTCACCGCATTCCCCACGGGCGACCG TGGCGGTGGCTGCGTTGGCGGCCTGCCCATGGGGAAACCCATGGGACGCTCTAATACAGACATGGTGCGA AGAGTCTATTGAGCTAGTTGGTAGTCCTCCGGCCCCTGAATGCGGCTAATCCTAACTGCGGAGCACACAC CCTCAAGCCAGAGGGCAGTGTGTCGTAACGGGCAACTCTGCAGCGGAACCGACTACTTTGGGTGTCCGTG TTTCATTTTATTCCTATACTGGCTGCTTATGGTGACAATTGAGAGATTGTTACCATATAGCTATTGGATT GGCCATCCGGTGACCAATAGAGCTATTATATATCTCTTTGTTGGGTTTATACCACTTAGCTTGAAAGAGG TTAAAACATTACAATTCATTGTTAAGTTGAATACAGCAAAATGGGAGCTCAAGTATCAACGCAAAAGACT GGGGCACATGAGACCGGGCTGAATGCTAGCGGCAATTCCATCATTCACTACACAAATATTAATTATTACA AGGATGCCGCATCCAACTCAGCCAATCGGCAGGATTTCACTCAAGACCCGGGCAAGTTCACAGAACCAGT AAAAGATATCATGATTAAATCACTACCAGCTCTCAACTCCCCCACAGTAGAGGAGTGCGGATACAGTGAC AGGGCGAGATCAATCACATTAGGTAACTCCACCATAACGACTCAGGAATGCGCCAACGTGGTGGTGGGCT ATGGAGTATGGCCAGATTATCTAAAGGATAGTGAGGCAACAGCAGAGGACCAACCGACCCAACCAGACGT TGCCACATGTAGGTTCTATACCCTTGACTCTGTGCAATGGCAGAAAACCTCACCAGGATGGTGGTGGAAG CTGCCCGATGCTTTGTCGAACTTAGGACTGTTTGGGCAGAACATGCAGTACCACTACTTAGGCCGAACTG GGTATACCGATCATGTGCAGTGCAATGCATCTAAGTTCCACCAAGGATGCTTGCTAGTAGTGTGTGTACC GGAAGCTGAGATGGGTTGCGCAACGCTAGACAACACCCCATCCAGTGCAGAATTGCTGGGGGGCGATACG GCAAAAGAGTTTGCGGACAAACCGGTCGCATCCGGGTCCAACAAGTTGGTACAGAGGGTGGTGTATAATG CAGGCATGGGGGTGGGTGTTGGAAACCTCACCATTTTCCCCCACCAATGGATCAACCTACGCACCAATAA TAGTGCTACAATTGTGATGCCATACACCAACAGTGTACCTATGGATAACATGTTTAGGCATAACAACGTC ACCCTAATGGTTATCCCATTTGTACCGCTAGATTACTGCCCTGGGTCCACCACGTACGTCCCAATTACGG TCACGATAGCCCCAATGTGTGCCGAGTACAATGGGTTACGTTTAGCAGGGCACCAGGGCTTACCAACCAT GAATACTCCGGGGAGCTGTCAATTTCTGACATCAGACGACTTCCAATCACCATCCGCCATGCCGCAATAT GACGTCACACCAGAGATGAGGATACCTGGTGAGGTGAAAAACTTGATGGAAATAGCTGAGGTTGACTCAG TTGTCCCAGTCCAAAATGTTGGAGAGAAGGTCAACTCTATGGAAGCATACCAGATACCTGTGAGATCCAA TGAAGGATCTGGAACGCAAGTATTCGGCTTTCCACTGCAACCAGGGTACTCGAGTGTTTTTAGTCGGACG CTCCTAGGAGAGATCTTGAACTATTATACACATTGGTCAGGCAGCATAAAGCTTACGTTTATGTTCTGTG GTTCGGCCATGGCTACTGGAAAATTCCTTTTGGCATACTCACCACTAGGTGCTGGAGCTCCTACAAAAAG GGTTGATGCCATGCTTGGTACTCATGTAGTTTGGGACGTGGGGCTACAATCAAGTTGCGTGCTGTGTATA CCCTGGATAAGCCAAACACACTACCGGTATGTTGCTTCAGATGAGTGTACCGCAGGGGGTTTTATTACGT GCTGGTATCAAACAAACATAGTGGTCCCAGCGGATGCCCAAAGCTCCTGTTACATCATGTGTTTCGTGTC AGCATGCAATGACTTCTCTGTCAGGCTATTGAAGGACACTCCTTTCATTTCGCAGGAAAACTTTTTCCAG GGCCCAGTGGAAGACGCGATAACAGCCGCTATAGGGAGAGTTGCGGATACCGTGGGTACAGGGCCAAACA ACTCAGAAGCTATACCAGCACTCACTGCTGCTGAGACAGGTCACACGTCACAAGTAGTGCCGGGTGACAC CATGCAGACACGCCACGTTAAGAACTACCATTCAAGGTCCGAGTCAACCATAGAGAACTTCCTATGTAGG TCAGCATGCGTGTACTTTACGGAGTATGAAAACTCAGGTGCCAAGCGGTATGCTGAATGGGTATTAACAC CACGACAAGCAGCACAACTTAGGAGAAAGCTAGAATTCTTTACCTACGTCCGGTTCGACCTGGAGCTGAC GTTTGTCATAACAAGTACTCAACAGCCCTCAACCACACAGAACCAAGACGCACAGATCCTAACACACCAA ATTATGTATGTACCACCAGGTGGACCTGTACCAGATAAAGTTGATTCATACGTGTGGCAAACATCTACGA ATCCCAGTGTGTTTTGGACCGAGGGAAACGCCCCGCCGCGCATGTCCATACCGTTTTTGAGCATTGGCAA CGCCTATTCAAATTTCTATGACGGATGGTCTGAATTTTCCAGGAACGGAGTTTACGGCATCAACACGCTA AACAACATGGGCACGCTATATGCAAGACATGTCAACGCTGGAAGCACGGGTCCAATAAAAAGCACCATTA GAATCTACTTCAAACCGAAGCATGTCAAAGCGTGGATACCTAGACCACCTAGACTCTGCCAATACGAGAA GGCAAAGAACGTGAACTTCCAACCCAGCGGAGTTACCACTACTAGGCAAAGCATCACTACAATGACAAAT ACGGGCGCAATTTGGACAACAATCAGGGGCAGTGTATGTGGGGACTACAGGGTAGTAAATAGACACTCAG CTACCAGTGCTGACTGGCAAAACTGTGTGTGGGAAAGTTACAACAGAGACCTCTTAGTGAGCACGACCAC AGCACATGGATGTGATATTATAGCCAGATGTCAGTGCACAACGGGAGTGTACTTTTGTGCGTCCAAAAAC AAGCACTACCCAATTTCGTTTGAAGGACCAGGTCTAGTAGAGGTCCAAGAGAGTGAATACTACCCCAGGA GATACCAATCCCATGTGCTTTTAGCAGCTGGATTTTCCGAACCAGGTGACTGTGGCGGTATCCTAAGGTG TGAGCATGGTGTCATTGGCATTGTGACCATGGGGGGTGAAGGCGTGGTCGGCTTTGCAGACATCCGTGAT CTCCTGTGGCTGGAAGATGATGCAATGGAACAGGGAGTGAAGGACTATGTGGAACAGCTTGGAAATGCAT TCGGCTCCGGCTTTACTAACCAAATATGTGAGCAAGTCAACCTCCTGAAAGAATCACTAGTGGGTCAAGA CTCCATCTTAGAGAAATCTCTAAAAGCCTTAGTTAAGATAATATCAGCCTTAGTAATTGTAGTGAGGAAC CACGATGACCTGATCACTGTGACTGCCACACTAGCCCTTATCGGTTGTACCTCGTCCCCGTGGCGGTGGC TCAAACAGAAGGTGTCACAATATTACGGAATCCCTATGCCTGAACGCCAAAACAATAGCTGGCTTAAGAA ATTTACTGAAATGACGAATGCTTGCAAGGGTATGGAATGGATAGCTGTCAAAATTCAGAAATTCATTGAA TGGCTCAAAGTAAAAATTTTGCCAGAGGTCAGGGAAAAACACGAATTCCTGAACAGACTTAAACAACTCC CCTTATTAGAAAGTCAGATCGCCACAATCGAGCAGAGCGCGCCATCCCAAAGTGACCAGGAACAATTATT TTCCAATGTCCAATACTTTGCCCACTATTGCAGAAAGTACGCTCCCCTCTACGCAGCTGAAGCAAAGAGG GTGTTCTCCCTTGAGAAGAAGATGAGCAATTACATACAGTTCAAGTCCAAATGCCGTATTGAACCTGTAT GTTTGCTCCTGCACGGGAGCCCTGGTGCCGGCAAGTCGGTGGCAACAAACTTAATTGGAAGGTCGCTTGC TGAGAAACTCAACAGCTCAGTGTACTCACTACCGCCAGACCCAGATCACTTCGACGGATACAAACAGCAG GCCGTGGTGATTATGGACGATCTATGCCATAATCCTGATGGGAAAGACGTCTCCTTGTTCTGCCAAATGG TTTCCAGTGTAGATTTTGTACCACCCATGGCTGCCCTAGAAGAGAAAGGCATTCTGTTCACCTCACCGTT TGTCTTGGCATCGACCAATGCAGGATCTATTAATGCTCCAACCGTGTCAGATAGCAGAGCCTTGGCAAGG AGATTTCACTTTGACATGAACATCGAGGTTATTTCCATGTACAGTCAGAATGGCAAGATAAACATGCCCA TGTCAGTCAAGACTTGTGACGATGAGTGTTGCCCGGTCAATTTTAAAAAGTGCTGCCCTCTTGTGTGTGG GAAGGCTATACAATTCATTGATAGAAGAACACAGGTCAGATACTCGCTAGACATGCTAGTCACCGAGATG TTTAGGGAGTACAATCATAGACATAGCGTGGGGACCACGCTTGAGGCACTGTTCCAGGGACCACCAGTAT ACAGAGAGTTCAAAATTAGCGTTGCACCAGAGACACCACCACCGCCCGCCATTGCGGACCTGCTCAAATC GGTAGACAGTGAGGCTGTGAGGGAGTACTGCAAAGAAAAAGGATGGTTGGTTCCTGAGATCAACTCCACC CTCCAAATTGAGAAACATGTCAGTCGGGCTTTCATTTGCTTACAGGCATTGACCACATTTGTGTCAATGG CTGGAATCATATATATAATATATAAGCTCTTTGCGGGTTTTCAAGGTGCTTATACAGGAGTGCCCAACCA GAAGCCCAGAGTGCCTACCCTGAGGCAAGCAAAAGTGCAAGGCCCTGCCTTTGAGTTCGCCGTCGCAATG ATGAAAAGGAACTCAAGCACGGTGAAAACTGAATATGGCGAGTTTACCATGCTGGGCATCTATGACAGGT GGGCCGTTTTGCCACGCCACGCCAAACCTGGGCCAACCATCTTGATGAATGATCAAGAGGTTGGTGTGCT AGATGCCAAGGAGCTAGTAGACAAGGATGGCACCAACTTAGAACTGACACTACTCGAATTGAACCGGAAT GAGAAGTTCGGAGACATCGGAGGCTTCGTAGCCAAGGAGGAAGTGGAGGTTAATGAGGCAGTGCTAGCAA TTAACACCAGCAAGTTTCCCAACATGTACATTCCAGTAGGACAGGTCACAGAATACGGCTTCCTAAACCT AGGTGGCACACCCACCAAGAGAATGCTTATGTACAACTTCCCCACAAGAGCAGGCCAGTGTGGTGGAGTG CTCATGTCCACCGGCAAGGTACTGGGTATCCATGTTGGTGGAAATGGCCATCAGGGCTTCTCAGCAGCAC TCCTCAAACACAACTTCAATGATGAGCAAGGTGAAATAGAATTTATTGAGAGCTCAAAGGTCGCCGGGTT TCCAGTCATCAACACACCAAGTAAAACAAAGTTGGAGCCTAGTGTTTTCCACCAAGTCTTTGTGGGGAAC AAAGAACCAGCAGTACTCAGGAGTGGGGATCCTCGTCTCAAGGCCAATTTTGAAGAGGCTATATTTTCCA AGTATATAGGAAATGTCAACACACACGTGGATGAGTACATGCTGGAAGCGGTGGACCACTACGCAGGCCA ACTAGCCACCCTAGATATCAGCACTGAACCAATGAAACTGGAGGACGCAAGGTACGGTACCGAGGGTCTT GAGGCGCTTGATCTTACAACGAGTGCCGGTTACCCATATGTTGCACTGGGTATCAAGAAGAGGGACATCC TCTCTAAGAAGACTAAGGACCTAACAAAGTTAAAGGAACGTATGGACAAGTATGGCCTGAACCTACCAAT GGTGACTCATGTAAAAGATGAGCTCAGGTCCATAGAGAAGGTAGCGAAAGGAAAGTCTAGGCTGATTGAG GCGTCCAGTTTGAATGATTCAGTGGCGATGAGACAGACATTTGGTAATCTGTACAAAACTTTCCACCTAA ACCCAGGGGTTGTGACTGGTAGTGCTGTTGGGTGTGACCCAGACCTCTTTTGGAGCAAGATACCAGTGAT GTTAGATGGACATCTCATAGCATTTGATTACTCTGGGTACGATGCTAGCTTAAGCCCTGTCTGGTTTGCT TGCCTAAAAATGTTACTTGAGAAGCTTGGATACACGCACAAAGAGACAAACTACATTGACTACTTGTGCA ACTCCCATCACCTGTACAGGAATAAACATTACTTTGTGAGGGGTGGCATGCCCTCGGGATGTTCTGGTAC CAGTATTTTCAACTCAATGATTAACAATATCATAATTAGGACACTAATGCTAAAAGTGTACAAAGGGATT GACTTGGACCAATTCAGGATGATCGCATATGGTGATGATGTGATCGCATCGTACCCATGGCCTATAGATG CATCTTTACTCGCTGAAGCTGGTAAGGGTTACGGGCTGATCATGACACCAGCAGATAAGGGAGAGTGCTT TAACGAAGTTACCTGGACCAACGTCACTTTCCTAAAGAGGTATTTTAGAGCAGATGAACAGTACCCCTTC TTGGTGCATCCTGCCATGCCCATGAAAGACATACACGAATCAATTAGATGGACCAAGGATCCAAAGAACA CCCAAGATCACGTGCGCTCACTGTGTCTATTAGCTTGGCATAACGGGGAGCACGAATATGAGGAGTTCAT CCGTAAAATTAGAAGCGTCCCAGTCGGACGTTGTTTGACCCTCCCCGCGTTTACAACTCTAGGCAGGAAG TGGTTGGACTCCTTTTAGATTAGAGACAATTGAAACAATTTAGATTGGCACAACCCTACTGTGCTAACCG AACCAGATAACGGTACAGTAGGGGTAAATTCTCCGCATTCGGTGCG
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