Strain Information Strain Name
Human immunodeficiency virus type 1
Strain Family
Retroviridae
RNA Binding Site
5'UTR - 3'UTR
  Virus Information Virus Name
Human immunodeficiency virus type 1 (HIV-1)
Taxonomy ID 11676

Protein Name Uniprot ID Host Species Pro Info Detection Method Infection Cell Cell ID Cell Originated Tissue Infection Time Interaction Score Fold Change
ATP-dependent RNA helicase DDX1 Q92499 Homo sapiens Pro Info . B95a Cells (Marmoset lymphoblastoid cell line) . . . . .
ATP-dependent RNA helicase DDX3X O00571 Homo sapiens Pro Info . B95a Cells (Marmoset lymphoblastoid cell line) . . . . .
ATP-dependent RNA helicase DDX3X O00571 Homo sapiens Pro Info . B95a Cells (Marmoset lymphoblastoid cell line) . . . . .
Calpain-6 Q9Y6Q1 Homo sapiens Pro Info Genome-wide siRNA screens HeLa P4.2 Cells (Human cervical carcinoma cell) . Cervix 48 h . .
DNA dC->dU-editing enzyme APOBEC-3A P31941 Homo sapiens Pro Info UV cross-linking (UVX) and immunoprecipitation (IP) HEK293 Cells (Human embryonic kidney cell); Mesc cells (Embryonic stem cell) . Kidney 48 h . .
DNA dC->dU-editing enzyme APOBEC-3F Q8IUX4 Homo sapiens Pro Info UV cross-linking (UVX) and immunoprecipitation (IP) HEK293 Cells (Human embryonic kidney cell); Mesc cells (Embryonic stem cell) . Kidney 48 h . .
DNA dC->dU-editing enzyme APOBEC-3G Q9HC16 Homo sapiens Pro Info UV cross-linking (UVX) and immunoprecipitation (IP) HEK293 Cells (Human embryonic kidney cell); Mesc cells (Embryonic stem cell) . Kidney 48 h . .
Dynein axonemal light chain 1 Q4LDG9 Homo sapiens Pro Info Genome-wide siRNA screens HeLa P4.2 Cells (Human cervical carcinoma cell) . Cervix 48 h . .
Dynein axonemal light chain 1 Q4LDG9 Homo sapiens Pro Info Genome-wide siRNA screens HeLa P4.2 Cells (Human cervical carcinoma cell) . Cervix 48 h . .
FYVE Q6ZV73 Homo sapiens Pro Info Genome-wide siRNA screens HeLa P4.2 Cells (Human cervical carcinoma cell) . Cervix 48 h . .
Helicase MOV-10 Q9HCE1 Homo sapiens Pro Info Mass spectrometry (MS) HEK293 Cells (Human embryonic kidney cell); Mesc cells (Embryonic stem cell) . Kidney 48 h . .
Helicase MOV-10 Q9HCE1 Homo sapiens Pro Info . B95a Cells (Marmoset lymphoblastoid cell line) . . . . .
Helicase with 2 CARD domains Q9BYX4 Homo sapiens Pro Info . B95a Cells (Marmoset lymphoblastoid cell line) . . . . .
Interferon-inducible protein 4 P55265 Homo sapiens Pro Info . B95a Cells (Marmoset lymphoblastoid cell line) . . . . .
Microtubule-associated protein 4 P27816 Homo sapiens Pro Info Genome-wide siRNA screens HeLa P4.2 Cells (Human cervical carcinoma cell) . Cervix 48 h . .
Mid1-interacting protein 1 Q9NPA3 Homo sapiens Pro Info Genome-wide siRNA screens HeLa P4.2 Cells (Human cervical carcinoma cell) . Cervix 48 h . .
Protein argonaute-2 Q9UKV8 Homo sapiens Pro Info High-throughput sequencing of RNA isolated by crosslinking immunoprecipitation (HITS-CLIP) Jurkat Cells (A derivative of the Jurkat cell line) . Blood 24 h . .
Protein flightless-1 homolog Q13045 Homo sapiens Pro Info Genome-wide siRNA screens HeLa P4.2 Cells (Human cervical carcinoma cell) . Cervix 48 h . .
Spastin Q9UBP0 Homo sapiens Pro Info Genome-wide siRNA screens HeLa P4.2 Cells (Human cervical carcinoma cell) . Cervix 48 h . .
Spectrin alpha chain Q13813 Homo sapiens Pro Info Genome-wide siRNA screens HeLa P4.2 Cells (Human cervical carcinoma cell) . Cervix 48 h . .
Y-box-binding protein 1 P67809 Homo sapiens Pro Info . HeLa Cells (Human cervical carcinoma cell) . Cervix 48 h . .
YTH domain-containing family protein 1 Q9BYJ9 Homo sapiens Pro Info Crosslinking with immunoprecipitation followed by sequencing (CLIP-seq) Hela-CD4 Cells (Human cervical carcinoma cell) . Cervix 72 h . .
Zinc finger protein 354A O60765 Homo sapiens Pro Info Genome-wide siRNA screens HeLa P4.2 Cells (Human cervical carcinoma cell) . Cervix 48 h . .
GO Term GO Category GO ID Adjusted P-value Odds Ratio Combined Score
RNA Binding Molecular Function GO:0003723 6.67E-08 19.9224446 411.4146348
Deoxycytidine Deaminase Activity Molecular Function GO:0047844 9.25E-07 881.2941176 15270.28546
Cytidine Deaminase Activity Molecular Function GO:0004126 2.90E-06 440.5588235 6951.597703
Hydrolase Activity, Acting On Carbon-Nitrogen Bonds, In Cyclic Amidines Molecular Function GO:0016814 8.93E-06 251.6722689 3615.70115
Deaminase Activity Molecular Function GO:0019239 1.20E-05 207.2283737 2870.510921
Single-Stranded RNA Binding Molecular Function GO:0003727 0.000106296 87.97058824 1010.312425
Tubulin Binding Molecular Function GO:0015631 0.000118053 20.67613039 232.101996
Double-Stranded RNA Binding Molecular Function GO:0003725 0.000278241 56.69259962 580.2325998
miRNA Binding Molecular Function GO:0035198 0.002614403 82.11111111 646.75878
Poly-Purine Tract Binding Molecular Function GO:0070717 0.002691669 76.44061303 591.8141768
Alpha-Tubulin Binding Molecular Function GO:0043014 0.003683918 61.55555556 451.387965
Regulatory RNA Binding Molecular Function GO:0061980 0.004125994 55.38888889 395.0710021
Microtubule Binding Molecular Function GO:0008017 0.007883126 14.76370887 94.56474163
mRNA Binding Molecular Function GO:0003729 0.011722137 12.46110057 73.94857278
Ribosome Binding Molecular Function GO:0043022 0.01333841 26.63587684 152.7884929
Zinc Ion Binding Molecular Function GO:0008270 0.01749906 10.25513401 55.37930045
Annealing Activity Molecular Function GO:0140666 0.018200431 262.8421053 1393.123889
tRNA-specific Adenosine Deaminase Activity Molecular Function GO:0008251 0.024042208 175.2105263 869.8689178
Adenosine Deaminase Activity Molecular Function GO:0004000 0.027793898 131.3947368 619.4395814
Eukaryotic Initiation Factor 4E Binding Molecular Function GO:0008190 0.027793898 131.3947368 619.4395814
P-body Cellular Component GO:0000932 6.27E-07 85.05128205 1526.294567
Cytoplasmic Stress Granule Cellular Component GO:0010494 1.74E-05 69.125 963.0096469
Germ Plasm Cellular Component GO:0060293 0.001664568 147.8888889 1325.54864
P Granule Cellular Component GO:0043186 0.001825969 100.7979798 832.5495793
Intracellular Membrane-Bounded Organelle Cellular Component GO:0043231 0.001825969 5.331100902 43.90625625
Nucleus Cellular Component GO:0005634 0.001825969 5.197206704 41.7989321
Microtubule Cytoskeleton Cellular Component GO:0015630 0.001825969 14.52810651 116.5632969
Cytoskeleton Cellular Component GO:0005856 0.012837405 8.144957983 48.37707757
RISC-loading Complex Cellular Component GO:0070578 0.030246649 175.2105263 869.8689178
Outer Dynein Arm Cellular Component GO:0036157 0.03109609 150.1729323 725.5830081
RISC Complex Cellular Component GO:0016442 0.04582862 87.57894737 380.8381799
Microtubule Cellular Component GO:0005874 0.047102899 12.02003643 50.89374437
Endoribonuclease Complex Cellular Component GO:1902555 0.04786821 65.67105263 268.0787716
Axon Cellular Component GO:0030424 0.04786821 10.82484948 43.73401815
Spindle Cellular Component GO:0005819 0.04786821 10.56196581 42.19310063
U12-type Spliceosomal Complex Cellular Component GO:0005689 0.067381005 38.89473684 139.5685146
Secretory Granule Lumen Cellular Component GO:0034774 0.088493585 6.958952583 22.5393472
Actin Cytoskeleton Cellular Component GO:0015629 0.088493585 6.71965812 21.34750314
Cortical Actin Cytoskeleton Cellular Component GO:0030864 0.088493585 24.40269278 76.72079425
Tertiary Granule Lumen Cellular Component GO:1904724 0.099413966 20.17004049 59.74559829
Base Conversion Or Substitution Editing Biological Process GO:0016553 5.06E-07 383.9807692 7750.098021
Regulation Of Viral Genome Replication Biological Process GO:0045069 7.97E-07 107.0860215 2038.522379
Negative Regulation Of Transposition Biological Process GO:0010529 8.92E-07 237.6071429 4400.031481
Protein Localization To Cytoplasmic Stress Granule Biological Process GO:1903608 2.20E-06 881.2941176 15270.28546
DNA Cytosine Deamination Biological Process GO:0070383 2.82E-06 705 11884.70853
Cytidine To Uridine Editing Biological Process GO:0016554 6.90E-06 440.5588235 6951.597703
DNA Deamination Biological Process GO:0045006 7.61E-06 391.5882353 6066.483731
Negative Regulation Of Viral Genome Replication Biological Process GO:0045071 7.61E-06 101.6887755 1565.403589
Defense Response To Symbiont Biological Process GO:0140546 8.29E-06 46.24009324 695.4500059
Regulation Of Transposition Biological Process GO:0010528 8.29E-06 320.3582888 4802.0871
Negative Regulation Of Single Stranded Viral RNA Replication Via Double Stranded DNA Intermediate Biological Process GO:0045869 8.29E-06 320.3582888 4802.0871
Negative Regulation Of Viral Process Biological Process GO:0048525 8.99E-06 87.38157895 1295.114587
Negative Regulation Of RNA Biosynthetic Process Biological Process GO:1902679 1.08E-05 271.0452489 3946.479949
Regulation Of Single Stranded Viral RNA Replication Via Double Stranded DNA Intermediate Biological Process GO:0045091 1.21E-05 251.6722689 3615.70115
Defense Response To Virus Biological Process GO:0051607 1.94E-05 35.86231884 495.9078534
Retrotransposon Silencing Biological Process GO:0010526 2.07E-05 195.7058824 2680.858518
Negative Regulation Of Translation Biological Process GO:0017148 6.09E-05 48.24514563 605.9305118
mRNA Destabilization Biological Process GO:0061157 0.000168587 87.97058824 1010.312425
RNA Modification Biological Process GO:0009451 0.000268142 73.27941176 803.6209136
Positive Regulation Of Cellular Biosynthetic Process Biological Process GO:0031328 0.000354697 29.13235294 309.8368358

Pathways Category Adjusted P-value Odds Ratio Combined Score
Human immunodeficiency virus 1 infection KEGG Pathway 0.014317395 16.6937799 112.6705658
RIG-I-like receptor signaling pathway KEGG Pathway 0.014317395 32.53594771 199.0576041
Measles KEGG Pathway 0.032812387 16.09326845 76.92909365
Hepatitis B KEGG Pathway 0.032812387 13.76388889 61.75381693
Influenza A KEGG Pathway 0.032812387 12.94771242 56.61336294
Coronavirus disease KEGG Pathway 0.048074568 9.541062802 36.33419769
Cytosolic DNA-sensing pathway KEGG Pathway 0.113615961 16.90831919 47.24134485
Herpes simplex virus 1 infection KEGG Pathway 0.142285693 4.364695341 10.6298931
Apoptosis KEGG Pathway 0.191932964 7.40537514 14.94651966
Viral carcinogenesis KEGG Pathway 0.240041198 5.153204794 8.705355125
Huntington disease KEGG Pathway 0.313726567 3.395168248 4.502969424
Amyotrophic lateral sclerosis KEGG Pathway 0.333186205 2.844280122 3.353680681
Pathways of neurodegeneration KEGG Pathway 0.381811529 2.165889407 2.085379339

HncRNA Host Species HncRNA Detail PMID Source Target Gene Target Gene ID Target Gene Source PMID Source
hsa-miR-1224-3p Homo sapiens HncRNA Info 22080513 ViRBase KDM7A . StarBase . StarBase
hsa-miR-125b-5p Homo sapiens HncRNA Info 17906637 ViRBase VPS51 . miRTarBase 25172656 miRTarBase
hsa-miR-125b-5p Homo sapiens HncRNA Info 21862142 ViRBase VPS51 . miRTarBase 25172656 miRTarBase
hsa-miR-125b-5p Homo sapiens HncRNA Info 22936931 ViRBase VPS51 . miRTarBase 25172656 miRTarBase
hsa-miR-138-5p Homo sapiens HncRNA Info 22112720 ViRBase ZEB2 . miRSponge 21770894 miRSponge
hsa-miR-149-5p Homo sapiens HncRNA Info 19082544 ViRBase ZBTB2 . miRTarBase 23144691 miRTarBase
hsa-miR-149-5p Homo sapiens HncRNA Info 21133815 ViRBase ZBTB2 . miRTarBase 23144691 miRTarBase
hsa-miR-149-5p Homo sapiens HncRNA Info 21786074 ViRBase ZBTB2 . miRTarBase 23144691 miRTarBase
hsa-miR-149-5p Homo sapiens HncRNA Info 22936931 ViRBase ZBTB2 . miRTarBase 23144691 miRTarBase
hsa-miR-149-5p Homo sapiens HncRNA Info 16236258 ViRBase ZBTB2 . miRTarBase 23144691 miRTarBase
hsa-miR-150-5p Homo sapiens HncRNA Info 17906637 ViRBase ZNRD2 . miRTarBase 25435958 miRTarBase
hsa-miR-150-5p Homo sapiens HncRNA Info 21862142 ViRBase ZNRD2 . miRTarBase 25435958 miRTarBase
hsa-miR-155-5p Homo sapiens HncRNA Info 22709537 ViRBase ZNF83 . miRSponge 20584899 miRSponge
hsa-miR-155-5p Homo sapiens HncRNA Info 22080513 ViRBase ZNF83 . miRSponge 20584899 miRSponge
hsa-miR-15a-5p Homo sapiens HncRNA Info 22080513 ViRBase YAP1 . miRTarBase 25743273 miRTarBase
hsa-miR-15b-5p Homo sapiens HncRNA Info 22080513 ViRBase WEE1 . miRTarBase 25594541 miRTarBase
hsa-miR-16-5p Homo sapiens HncRNA Info 22080513 ViRBase ZYX . miRSponge 21360639 miRSponge
hsa-miR-21-5p Homo sapiens HncRNA Info 22080513 ViRBase YOD1 . miRTarBase 22227207 miRTarBase
hsa-miR-211-5p Homo sapiens HncRNA Info 22112720 ViRBase TXNIP . miRTarBase 27121770 miRTarBase
hsa-miR-223-3p Homo sapiens HncRNA Info 17906637 ViRBase ZEB1 . miRTarBase 27744452 miRTarBase
hsa-miR-223-3p Homo sapiens HncRNA Info 21862142 ViRBase ZEB1 . miRTarBase 27744452 miRTarBase
hsa-miR-223-3p Homo sapiens HncRNA Info 22080513 ViRBase ZEB1 . miRTarBase 27744452 miRTarBase
hsa-miR-24-3p Homo sapiens HncRNA Info 22080513 ViRBase ZNRD2 . miRTarBase 24314651 miRTarBase
hsa-miR-28-5p Homo sapiens HncRNA Info 17906637 ViRBase TP53 . miRTarBase 24681953 miRTarBase
hsa-miR-28-5p Homo sapiens HncRNA Info 21862142 ViRBase TP53 . miRTarBase 24681953 miRTarBase
hsa-miR-28-5p Homo sapiens HncRNA Info 21224041 ViRBase TP53 . miRTarBase 24681953 miRTarBase
hsa-miR-29a-3p Homo sapiens HncRNA Info 22936931 ViRBase ZFP36 . miRTarBase 23401122 miRTarBase
hsa-miR-29a-3p Homo sapiens HncRNA Info 19102781 ViRBase ZFP36 . miRTarBase 23401122 miRTarBase
hsa-miR-29a-3p Homo sapiens HncRNA Info 22080513 ViRBase ZFP36 . miRTarBase 23401122 miRTarBase
hsa-miR-29a-3p Homo sapiens HncRNA Info 23043098 ViRBase ZFP36 . miRTarBase 23401122 miRTarBase
hsa-miR-29a-3p Homo sapiens HncRNA Info 16236258 ViRBase ZFP36 . miRTarBase 23401122 miRTarBase
hsa-miR-29a-3p Homo sapiens HncRNA Info 19560422 ViRBase ZFP36 . miRTarBase 23401122 miRTarBase
hsa-miR-29b-3p Homo sapiens HncRNA Info 19102781 ViRBase VEGFA . miRSponge 18320040 miRSponge
hsa-miR-29b-3p Homo sapiens HncRNA Info 22080513 ViRBase VEGFA . miRSponge 18320040 miRSponge
hsa-miR-29b-3p Homo sapiens HncRNA Info 22112720 ViRBase VEGFA . miRSponge 18320040 miRSponge
hsa-miR-29b-3p Homo sapiens HncRNA Info 16236258 ViRBase VEGFA . miRSponge 18320040 miRSponge
hsa-miR-29c-3p Homo sapiens HncRNA Info 22080513 ViRBase WNT4 . miRSponge 21436257 miRSponge
hsa-miR-30a-5p Homo sapiens HncRNA Info 22709537 ViRBase WDR82 . miRSponge 16239240 miRSponge
hsa-miR-324-5p Homo sapiens HncRNA Info 16236258 ViRBase SP1 . miRTarBase 26177288 miRTarBase
hsa-miR-324-5p Homo sapiens HncRNA Info 21786074 ViRBase SP1 . miRTarBase 26177288 miRTarBase
hsa-miR-326 Homo sapiens HncRNA Info 22112720 ViRBase SP1 . miRTarBase 27460077 miRTarBase
hsa-miR-326 Homo sapiens HncRNA Info 23042677 ViRBase SP1 . miRTarBase 27460077 miRTarBase
hsa-miR-378a-5p Homo sapiens HncRNA Info 16236258 ViRBase TUSC2 . miRSponge 18077375 miRSponge
hsa-miR-378a-5p Homo sapiens HncRNA Info 21786074 ViRBase TUSC2 . miRSponge 18077375 miRSponge
hsa-miR-382-5p Homo sapiens HncRNA Info 17906637 ViRBase YBX1 . miRTarBase 25292190 miRTarBase
hsa-miR-382-5p Homo sapiens HncRNA Info 21862142 ViRBase YBX1 . miRTarBase 25292190 miRTarBase
hsa-miR-A1f Homo sapiens HncRNA Info 22709537 ViRBase . . . . .
hsa-miR-A1r Homo sapiens HncRNA Info 22709537 ViRBase . . . . .
hsa-miR-A2f Homo sapiens HncRNA Info 22709537 ViRBase . . . . .
hsa-miR-A2r Homo sapiens HncRNA Info 22709537 ViRBase . . . . .
hsa-miR-A3f Homo sapiens HncRNA Info 22709537 ViRBase . . . . .
hsa-miR-A3r Homo sapiens HncRNA Info 22709537 ViRBase . . . . .
hsa-miR-B1f Homo sapiens HncRNA Info 22709537 ViRBase . . . . .
hsa-miR-B1r Homo sapiens HncRNA Info 22709537 ViRBase . . . . .
hsa-miR-B2f Homo sapiens HncRNA Info 22709537 ViRBase . . . . .
hsa-miR-B2r Homo sapiens HncRNA Info 22709537 ViRBase . . . . .
hsa-miR-B3f Homo sapiens HncRNA Info 22709537 ViRBase . . . . .
hsa-miR-B3r Homo sapiens HncRNA Info 22709537 ViRBase . . . . .
NEAT1 Homo sapiens HncRNA Info 23362321 ViRBase ADARB2 ENSG00000185736 StarBase . StarBase
GO Term GO Category GO ID Adjusted P-value Odds Ratio Combined Score
DNA-binding Transcription Repressor Activity, RNA Polymerase II-specific GO Molecular Function GO:0001227 0.009687583 18.35332404 164.0966183
Ubiquitin Protein Ligase Binding GO Molecular Function GO:0031625 0.052108753 11.61233307 66.96092737
Ubiquitin-Like Protein Ligase Binding GO Molecular Function GO:0044389 0.052108753 10.8715495 60.72350327
mRNA 3'-UTR Binding GO Molecular Function GO:0003730 0.052108753 21.85384615 117.370444
Cis-Regulatory Region Sequence-Specific DNA Binding GO Molecular Function GO:0000987 0.052108753 5.081803993 26.04329499
Zinc Ion Binding GO Molecular Function GO:0008270 0.052108753 9.174711928 47.016158
RNA Polymerase II Cis-Regulatory Region Sequence-Specific DNA Binding GO Molecular Function GO:0000978 0.052108753 4.966296277 24.99980607
Sequence-Specific Double-Stranded DNA Binding GO Molecular Function GO:1990837 0.052108753 6.021878419 29.80369184
tRNA-specific Adenosine Deaminase Activity GO Molecular Function GO:0008251 0.052108753 158.5079365 771.8855079
C-C Chemokine Binding GO Molecular Function GO:0019957 0.052108753 158.5079365 771.8855079
Vascular Endothelial Growth Factor Receptor 2 Binding GO Molecular Function GO:0043184 0.052108753 135.8571429 643.5130349
RNA Polymerase II Transcription Regulatory Region Sequence-Specific DNA Binding GO Molecular Function GO:0000977 0.052108753 4.522179364 21.11271884
Adenosine Deaminase Activity GO Molecular Function GO:0004000 0.052108753 118.8690476 549.1072571
Histone H3K36 Demethylase Activity GO Molecular Function GO:0051864 0.052108753 118.8690476 549.1072571
Vascular Endothelial Growth Factor Receptor Binding GO Molecular Function GO:0005172 0.055344636 86.43722944 374.5602037
Platelet-Derived Growth Factor Receptor Binding GO Molecular Function GO:0005161 0.055344636 86.43722944 374.5602037
Transition Metal Ion Binding GO Molecular Function GO:0046914 0.055344636 6.805507145 29.48226157
Histone H3K9 Demethylase Activity GO Molecular Function GO:0032454 0.055344636 79.23015873 337.0293803
K63-linked Deubiquitinase Activity GO Molecular Function GO:0061578 0.055344636 79.23015873 337.0293803
Cytokine Activity GO Molecular Function GO:0005125 0.057175944 11.25113636 46.39385959
Nucleolus GO Cellular Component GO:0005730 0.000197697 11.73630017 132.3668458
Nuclear Lumen GO Cellular Component GO:0031981 0.000197697 11.59422165 129.8891699
Intracellular Non-Membrane-Bounded Organelle GO Cellular Component GO:0043232 0.001988856 7.381032548 62.65669456
Cytoplasmic Stress Granule GO Cellular Component GO:0010494 0.022718581 26.8972973 155.0783474
PTW/PP1 Phosphatase Complex GO Cellular Component GO:0072357 0.038179179 190.2190476 955.5316922
Adherens Junction GO Cellular Component GO:0005912 0.05437044 13.39864865 59.60126813
Set1C/COMPASS Complex GO Cellular Component GO:0048188 0.05437044 86.43722944 374.5602037
U12-type Spliceosomal Complex GO Cellular Component GO:0005689 0.110080237 35.18694885 122.9572755
Intracellular Membrane-Bounded Organelle GO Cellular Component GO:0043231 0.111442288 2.389964505 7.88697761
Nucleus GO Cellular Component GO:0005634 0.111442288 2.39633078 7.692946228
Cell-Cell Junction GO Cellular Component GO:0005911 0.111442288 6.626599327 20.9642342
Platelet Alpha Granule Lumen GO Cellular Component GO:0031093 0.169587655 14.58827839 38.75776638
P-body GO Cellular Component GO:0000932 0.189342265 11.55400697 28.15044833
Platelet Alpha Granule GO Cellular Component GO:0031091 0.189342265 10.76298701 25.50548161
trans-Golgi Network Membrane GO Cellular Component GO:0032588 0.189342265 9.561808562 21.59922754
Golgi Lumen GO Cellular Component GO:0005796 0.189342265 9.561808562 21.59922754
Recycling Endosome GO Cellular Component GO:0055037 0.259586932 5.973477999 10.905108
Endocytic Vesicle Membrane GO Cellular Component GO:0030666 0.259586932 5.973477999 10.905108
Endocytic Vesicle GO Cellular Component GO:0030139 0.297464788 4.831013431 7.900234874
trans-Golgi Network GO Cellular Component GO:0005802 0.33960812 3.916269841 5.684569336
Negative Regulation Of DNA-templated Transcription GO Biological Process GO:0045892 0.000338271 12.92080557 184.2849657
Negative Regulation Of Transcription By RNA Polymerase II GO Biological Process GO:0000122 0.003124494 11.8654321 134.6290393
Regulation Of Transcription By RNA Polymerase II GO Biological Process GO:0006357 0.003576104 7.416584077 79.18574619
Negative Regulation Of Gene Expression GO Biological Process GO:0010629 0.003576104 17.45779278 183.6241287
Regulation Of Epithelial Cell Apoptotic Process GO Biological Process GO:1904035 0.006680765 221.8777778 2145.574386
Regulation Of Epithelial Cell Proliferation GO Biological Process GO:0050678 0.010283686 35.68779904 318.842598
Cellular Response To Gamma Radiation GO Biological Process GO:0071480 0.010283686 142.6 1268.176179
Positive Regulation Of Transcription From RNA Polymerase II Promoter In Response To Stress GO Biological Process GO:0036003 0.010283686 133.0866667 1167.002835
Positive Regulation Of Cell Differentiation GO Biological Process GO:0045597 0.01266117 15.69016328 131.1196016
Mammary Gland Development GO Biological Process GO:0030879 0.01266117 99.79 822.4999723
Response To Gamma Radiation GO Biological Process GO:0010332 0.01266117 99.79 822.4999723
Regulation Of Nuclear-Transcribed mRNA Catabolic Process, Deadenylation-Dependent Decay GO Biological Process GO:1900151 0.012702955 95.03333333 774.7119652
Cellular Response To Growth Factor Stimulus GO Biological Process GO:0071363 0.023709491 20.59487535 151.7486845
Regulation Of DNA-templated Transcription GO Biological Process GO:0006355 0.023709491 5.393043738 39.4333661
Regulation Of Cellular Senescence GO Biological Process GO:2000772 0.023709491 60.43939394 441.498777
Negative Regulation Of Transferase Activity GO Biological Process GO:0051348 0.024846927 56.98 409.8811226
RNA Transport GO Biological Process GO:0050658 0.025984219 53.89459459 382.0070939
Positive Regulation Of Osteoblast Differentiation GO Biological Process GO:0045669 0.028554848 47.46666667 325.0102572
Negative Regulation Of Macromolecule Metabolic Process GO Biological Process GO:0010605 0.028554848 17.07937877 116.8249059
Regulation Of Gene Expression GO Biological Process GO:0010468 0.028554848 6.30809545 43.09176514

Pathways Category Adjusted P-value Odds Ratio Combined Score
MicroRNAs in cancer KEGG Pathway 0.018636227 14.28612927 114.4311518
Breast cancer KEGG Pathway 0.018636227 21.74780702 163.6005331
Bladder cancer KEGG Pathway 0.018636227 51.12564103 357.2694654
Transcriptional misregulation in cancer KEGG Pathway 0.018636227 16.53216374 111.5694469
Kaposi sarcoma-associated herpesvirus infection KEGG Pathway 0.018636227 16.44432133 110.7307137
Proteoglycans in cancer KEGG Pathway 0.018636227 15.45805107 101.4100137
Human cytomegalovirus infection KEGG Pathway 0.019892454 14.0512091 88.43806383
Basal cell carcinoma KEGG Pathway 0.019892454 32.65081967 200.309013
Pathways in cancer KEGG Pathway 0.019892454 8.201981868 49.28522349
Mitophagy KEGG Pathway 0.019892454 30.16969697 180.5438416
Pancreatic cancer KEGG Pathway 0.022504927 26.8972973 155.0783474
Prostate cancer KEGG Pathway 0.033235284 20.92947368 110.6893807
Human papillomavirus infection KEGG Pathway 0.033290142 9.459242619 49.25420485
Thyroid hormone signaling pathway KEGG Pathway 0.042775325 16.68823529 81.11126266
Cell cycle KEGG Pathway 0.042775325 16.27540984 78.33666458
Fluid shear stress and atherosclerosis KEGG Pathway 0.049936009 14.48248175 66.53066798
Gastric cancer KEGG Pathway 0.053673778 13.49047619 60.18189405
Cushing syndrome KEGG Pathway 0.054589293 12.95751634 56.8293214
Hippo signaling pathway KEGG Pathway 0.054589293 12.30869565 52.80609654
Wnt signaling pathway KEGG Pathway 0.054589293 12.08170732 51.41423854

>U43141.1 Human immunodeficiency virus type 1 complete genome AAGCTTGCCTTGAGTGCTTCAAGTAGTGTGTGCCCGTCTGTTGTGTGACTCTGGTAGCTAGAGATCCCTC AGATCCTTTTAGTCAGTGTGGAAAATCTCTAGCAGTGGCGCCCGAACAGGGACTTGAAAGCGAAAGTAGA ACCAGAGGAGATCTCTCGACGCAGGACTCGGCTTGCTGAAGCGCGCACGGCAAGAGGCGAGGGGCGGCGA CTGGTGAGTACGCCAAAATTTTGACTAGCGGAGGCTAGAAGGAGAGAGATGGGTGCGAGAGCGTCAGTAT TAAGCGGGGGAGAATTAGACAAATGGGAAAAAATTCGGTTAAGGCCAGGGGGAAAGAAAAAATATCAATT AAAACATATAGTATGGGCAAGCAGGGAGCTAGAACGATTCGCAGTTAATCCTGGCCTGTTAGAAACATCA GAAGGCTGTAGACAGATAATGGGACAGCTACAACCGTCCCTTCAGACAGGATCAGAAGAACTTAGATCAT TATATAATACAGTAGCAACCCTCTATTGTGTGCATCAAAAGATAGAGGTAAAAGACACCAAGGAAGCTTT AGACAAGGTAGAGGAAGAGCAAAACAACAGTAAGAAAAAGGCACAGCAAGAAGCAGCTGACGCAGGAAAC AGAAACCAGGTCAGCCAAAATTACCCTATAGTGCAAAACCTACAGGGACAAATGGTACATCAGGCCATAT CACCTAGAACTTTAAATGCATGGGTAAAAGTAGTGGAAGAGAAGGCTTTCAGCCCAGAAGTAATACCCAT GTTTTCAGCATTATCAGAAGGAGCCACCCCACAAGATTTAAACACCATGCTAAACACAGTGGGGGGACAT CAAGCAGCCATGCAAATGTTAAAAGAAACCATCAATGAGGAAGCTGCAGAATGGGATAGATTGCACCCAG TGCATGCAGGGCCTATTGCACCAGGCCAGATGAGAGAACCAAGGGGAAGTGACATAGCAGGAACTACTAG TACCCTTCAGGAACAAATAGGATGGATGACAAATAATCCACCTATCCCAGTAGGAGAAATATATAAGAGA TGGATAATCCTGGGATTAAATAAAATAGTAAGAATGTATAGCCCTACCAGCATTCTGGATATAAAACAAG GACCAAAAGAACCCTTTAGAGATTATGTAGACCGGTTCTATAAAACCCTAAGAGCCGAGCAAGCTACACA GGAAGTAAAAAATTGGATGACAGAAACCTTGTTGGTCCAAAATGCGAATCCAGATTGTAAGACTATTTTA AAAGCATTAGGACCAGCAGCTACACTAGAAGAAATGATGACAGCATGTCAGGGAGTGGGGGGACCCGGCC ATAAAGCAAGAGTTTTGGCTGAAGCAATGAGCCAAGTAACAGGTTCAGCTGCCATAATGATGCAGAGAGG CAATTTTAGGAACCAAAGAAAGACTGTTAAGTGTTTCAATTGTGGCAAAGAAGGGCACATAGCCAGAAAT TGCAGGGCCCCTAGGAAAAAGGGCTGTTGGAAATGTGGAAAGGAAGGACATCAAATGAAGGATTGCACAG AAAGACAGGCTAATTTTTTAGGGAAGATCTGGCCTTCCCACAAGGGGAGGCCAGGAAATTTTCTTCAGAG CAGACCAGAGCCAACAGCCCCACCAGAAGAGAGCTTCAGGTTTGGGGAAGCAACAGCTCCCTCTCAGAAG CAGGAGCCGATAGACAAGGAACTGTATCCCTTAGCCTCCCTCAAATCACTCTTTGGCAGCGACCCCTCGT CACAATAAAGATAGGGGGGCAACTAAAGGAAGCTCTATTAGATACAGGAGCAGATGATACAGTAGTAGAA GAAATGAGTTTGCCAGGAAGATGGAAACCAAAAATGATAGGAGGAATTGGAGGTTTTATCAAAGTAAGAC AGTATGATCAGATACTCGTAGAAATCTGTGGACATAAAGCTATAGGTACAGTATTAGTAGGACCTACACC TGTCAACATAATTGGAAGAAATCTGTTGACTCAGATTGGTTGCACTTTAAATTTTCCCATTAGTCCTATT GAAACTGTACCAGTAAAATTAAAGCCAGGAATGGATGGCCCAAAAGTTAAACAATGGCCATTGACAGAAG AAAAAATAAAAGCATTAATAGAAATTTGTACAGAAATGGAAAAGGAAGGGAAAATTTCAAAAATTGGGCC TGAAAATCCATACAATACTCCAGTATTTGCCATAAAGAAAAAGGACAGTACTAAATGGAGAAAATTAGTA GATTTCAGAGAACTTAATAAAAGAACTCAAGATTTCTGGGAAGTTCAATTAGGAATACCACATCCCGCAG GGTTAAAAAAGAAAAAATCAGTAACAGTCCTGGATGTGGGTGATGCATATTTTTCAGTTCCCCTAGATAA AGACTTCAGAAAATATACTGCATTTACCATACCTAGTATAAACAATGAGACACCAGGGATTAGATATCAG TACAATGTGCTTCCACAGGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCATGACAAAAATCTTAG AGCCTTTTAGAAAACAAAATCCAGACATAGTTATCTATCAATACATGGATGATTTGTATGTAGGATCTGA CTTAGAAATAGAGCAGCATAGAACAAAAATAGAGGAACTGAGACAGCATCTGTTGAAGTGGGGATTTACC ACACCAGACAAAAAACATCAGAAAGAACCTCCATTCCTTTGGATGGGTTATGAACTCCATCCTGATAAAT GGACAGTACAGCCTATAGTGCTGCCAGAAAAAGACAGCTGGACTGTCAATGACATACAGAAGTTAGTGGG AAAATTGAATTGGGCAAGTCAGATTTATGCAGGGATTAAAGTAAAGCAATTATGTAAGCTACTTAGGGGA CCCAAAGCACTAACAGAAGTAATACCACTAACAAAAGAAGCAGAGCTAGAACTAGCAGAAAACAGGGAGA TTCTAAAAGAACCAGTACATGGAGTGTATTGTGACCCATCAAAAGACTTAGTAGCAGAAATACAGAAGCA GGGGGAAGGCCAATGGACATATCAAATTTATCAAGAACCATTTAAGAATCTGAAAACAGGAAAGTATGCA AGAATGAGGGGTGCCCACACTAATGATATAAAACAGTTAACAGAGGCAGTGCAAAAAATAGCCACAGAAG GCATAGTAATATGGGGAAAGACTCCTAAATTTAGACTACCCATACAAAAGGAAACATGGGAAGCATGGTG GACGGAGTATTGGCAAGCCACCTGGATTCCTGAGTGGGAGTTTGTCAATACCCCTCCCTTAGTGAAATTA TGGTACCAGTTAGAGAAAGAACCCATAGTAGGAGCAGAAACTTTCTATGTAGATGGGGCAGCTAATAGGG AGACTAAATTAGGAAAAGCAGGATATGTTACTGACAGGGGAAGACAAAAAGTTGTCTCCCTAAATGACAC AACAAATCAGAAGACTGAGTTACAAGCAATTCATCTAGCTTTGCAGGATTCGGGACTAGAAGTAAACATA GTAACAGACTCACAATATGCATTAGGAATCATTCAAGCACAACCAGATAAAAGTGAATCAGAGTTAGTCA GTCAAATAATAGAGCAGTTAATAAAAAAGGAAAAGGTCTACCTGGCATGGGTACCAGCACACAAAGGAAT TGGAGGAAATGAACAAGTAGATAAATTAGTCAGTGCTGGAATCAGAAAAGTACTATTTTTAGATGGAATA GATAAGGCCCAAGAAGACCATGAGAAATATCACAGTAATTGGAGAGCAATGGCTAATGATTTTAACCTGC CACCTGTAGTAGCAAAAGAAATAGTAGCCAGCTGTGATAAATGTCAGCTAAAAGGAGAAGCCATGCATGG ACAAGTAGACTGTAGTCCAGGAATATGGCAACTAGATTGTACACATTTAGAAGGAAAAATTATCCTGGTA GCAGTTCATGTAGCTAGTGGATATATAGAAGCAGAAGTCATTCCAGTAGAGACAGGGCAGGAAACAGCAT ATTTTCTCTTAAAATTAGCAGGAAGATGGCCAGTAAAAACAGTACATACAGACAATGGCCCTAATTTCAC CAGTACTACGGTTAAGGCCGCCTGTTGGTGGGCAGGGATCAAGCAGGAATTTGGCATTCCCTACAATCCC CAAAGTCAAGGGGTAGTAGAATCTATGAATAAAGAGTTAAAGAAAATTATAGGACAGGTAAGAGATCAGG CTGAACATCTTAAGACAGCAGTACAAATGGCAGTATTCATCCACAATTTTAAAAGAAAAGGGGGGATTGG GGGGTACAGTGCAGGGGAAAGAATAGTAGACATAATAGCAACAGACATACAAACTAAAGAATTACAAAAA CAAATTACAAAAATTCAAAATTTTCGGGTTTATTACAGGGACAGCAGAGAACCATTTTGGAAAGGACCAG CAAAGCTTCTCTGGAAAGGTGAAGGGGCAGTAGTAATACAAGATAATAGTGACATAAAAGTAGTGCCAAG AAGAAAAGCAAAGATCATTAGGGATTATGGAAAACAGATGGGCAGTGATGATTGTGTGGCAAGTAGACAG GATGAGGATTAGAACATGGAACAGTTTAGTAAAACACCATATATATTGTTCACGGAAAGCTAAGAACTGG GTTTATAGACATCACTATGAAAGCACTAATCCAAGAGTAAGTTCAGAAGTACACATCCCACTAGGGGAAG CTAAATTGGTAATAACAACATATTGGGGTCTGCATACAGGAGAAAGAGACTGGCATTTGGGCCAGGGAGC CTCCATAGAATGGAGGAAAAGGAGATATAGCACACAAGTAGACCCTAACCTAGCAGACCAACTAATTCAC CTGTATTATTTTGATTGTTTTTCAGAATCTGCTATAAGAAATGCCATATTAGGACGTATAGTTAGTCCTA GGTGTGAATATCAAGCAGGACATAGCAAGGTAGGATCTCTACAATACTTGGCACTAGCAGCATTAACAAC ACCAAAAAAGATAAAGCCACCTTTGCCTATTGTTACAAAACTGACAGAAGATAGATGGAACAAGCCCCAG AAGACCAAGGGCCACAGAGGGAGCCATACAATGCATGGACACTAGAGCTTTTAGAGGAGCTTAAGAGTGA AGCTGTTAGACATTTTCCCAGGATATGGCTACATAGCTTAGGACAATATATCTATGAAACTTATGGGGAT ACTTGGGCAGGAGTAGAAGCCATAATAAGAATACTGCAACAACTGCTGTTTATTCATTTCAGAATTGGGT GTCGCCATAGCAGAATAGGCATTACTCCACAGAGGAGAGCAAGAAATGGAGCCAGTAGATCCTAGACTAG AGCCCTGGAAGCATCCAGGAAGTCAGCCTAGGACCCCTTGTACCAATTGCTATTGTAAAAAGTGTTGCCT TCATTGCCAAGTTTGTTTCACAAGAAAAGGCTTAAGCATCTCCTATGGCAGGAAGAAGCGGAGACAGCGA CGAAGAGCTCCTCAAGACAGTCAGACTCATCAAGTTTCTCTACCAAAGCAGTAAGTAGTACATGTGATGT TATCTTTACAAATAGCAGCAATAGTAGCATTAGTAGTAGCAGCAATAATAGTAATAGTTGTGTGGACCAT AGTAGTCATAGAATATAGGAAATTATTAAGACAAAGAAAAATAAACAGGTTAATTGATAGACTAACAGAA AGAGCAGAAGACAGTGGCAATGAAAGTGAAGGAGACCAGGAAGAATTATCAGCGCTTGTGGAGAGGGGGC ACCTTGCTCCTTGGGATGTTAATGATCAGTAGTGTTGCAGGAAACTTGTGGGTCACAGTCTATTATGGGG TACCTGTGTGGAAAGAAGCAACTACCACTCTATTTTGTGCATCAGATGCTAAAGCTTATGATACAGAGGT ACATAATGTTTGGGCCACACATGCCTGTGTACCCACAGACCCCAACCCACAAGAAGTAGTAATGGGAAAT GTGACAGAAAATTTTAACATGTGGAAAAATGACATGGTAGAACAGATGCAGGAAGATATAATCAGTTTAT GGGATCAAAGCCTAAAGCCATGTGTAAAATTAACCCCACTCTGTGTTACTTTAAAATGCACTGATTATAA TAATGCCACTAACAGTAGTTGGGGAAGGATGGAGAAAGGAGAAATACAAAACTGCTCTTTCAAGGTCACC ACAAACATAAGAGATAAGGTACAGAAAGAATCTGCACTTTTTTATAAAACTGATGTAGTACCAATAGATA ATAATAAGACTAGTAATAGGGATAATACTACCAGCTATATGTTGATACATTGTAATAGATCTGTCATTAC ACAAGCCTGTCCAAAGGTATCCTTTGAGCCAATTCCCATACATTATTGTGCCCCAGCTGGTTTTGCGATT TTAAAGTGTAATGATAAAAAGTTCAATGGAAAAGGACCATGTAAAAATGTCAGCACAGTACAGTGTACAC ATGGAATTAGGCCAGTAGTGTCAACTCAACTGCTGTTAAATGGTAGTCTAGCAGAAAAAGAAGTAGTAAT TAGATCTGACAATTTCACAGATAATACTAAAACCATAATAGTACATCTGAACGAATCTGTAGAAATTAAT TGTACAAGACCCAACAACAATACAAGAAAAGGTATACATATAGGACCAGGGAGAGCAGTTTATACGACAG GAAGAATAGTAGGAGATATAAGACTAGCACATTGTAACATTAGTAGAGCAAGATGGAATAAAACTCTAAA CCAAATATTTAGAAAATTAAGAGAAATTAGACAATTTGAAAATAAAACAATAGTCTTTAATCGATCCTCA GGAGGAGACCCAGAAATTGTAATGCACAGCTTTAATTGTGGAGGGGAATTTTTCTACTGTAATTCAACAA AACTGTTTAATAGTACTTGGAATAATACTAGTACTTGGAATGATAATGGAAATGACACTATCATACTGCC ATGTAGAATAAAACAAATTATAAACATGTGGCAGGAAGTAGGAAAAGCAATGTATGCCCCTCCCATTGGA GGACTAATTAGATGTTCATCAAATATTACAGGGCTGATATTAACAAGAGATGGTGGTAATGATAACAGTA GTACCACCGAGATCTTCAGACCTGGAGGGGGAAATATGAGGGACAATTGGAGAAATGAATTATATAAATA TAAAGTAGTAAAAATTGAACCATTAGGAGTAGCACCCACCAAGGCAAAGAGAAGAGTGGTGCAGAGAGAA AAAAGAGCGGTGGGAATGCTAGGAGCTATGTTCCTTGGGTTCTTGGGAGCAGCAGGAAGCACTATGGGCG CACGGTCACTGACGCTGACGGTACAGGCCAGACAATTATTGTCTGGTATAGTGCAACAGCAAAACAATTT GCTGAGAGCTATTGAGGCGCAACAACATCTGTTGCAACTCACAGTCTGGGGCATCAAACAGCTCCAGGCA AGAGTCCTGGCTGTGGAAAGATACCTAAGGGATCAACAGCTCCTAGGGATTTGGGGTTGCTCTGGAAAAC TCATCTGCACCACTACTGTGCCTTGGAATGCTAGTTGGAGTAATAAAACCCTGGATCAGATTTGGAATAA CATGACCTGGATGGAGTGGGAAAGAGAAATTGACAATTACACAAGCTTAATATATACCTTAATTGAACAA TCGCAAAACCAACAAGAAAAGAATGAACAAGAATTATTGGAATTGGATAAGTGGGCAAGTTTGTGGAGTT GGTATGACATATCAAATTGGCTGTGGTATATAAAAATATTCATAATGATAGTAGGAGGCTTGATAGGTTT AAGAATAGTTTTTGCTGTGCTTTCTATAGTGAATAGAGTTAGGCAGGGATACTCACCATTGTCGTTTCAG ACCCTCCTCCCAGCAACGAGGGGACCCCGACAGCCCGAAGAAATCGAAGAAGAAGGTGGAGAGAGAGACA GAGGCAGATCCGTTCGATTAGTGAGCGGATTCTTAGCACTTTTCTGGGACGACCTGCGGAGCCTGTGCCT CTTCAGCTACCGCCGCTTGAGAGACTTACTCTTGATTGTAGCGAAGATTGTGGAAACTCTGGGACGCAGG GGGTGGGAAGTCCTCAAGTATTGGTGGAATCTCCTGCAGTATTGGAGCCAGGAACTAAAGAATAGTGCTG TCAGCTTGTTCAATACTATAGCTATAGCAGTAGCTGAGGGAACAGATAGGGTTATAGAAGTAGTACAAAG AGCTTGTAGAGCAATTCTCCACATACCTAGAAGAGTGAGACAGGGCTTGGAAAGGGCCTTGCTATAAAAT GGGTGGCAAGTGGTCAAAATGTAGTGGATGGCCTACTGTAAGGGAAAGAATGAAACAAGCTGAGCCTGAG CCAGCAGCAGATGGGGTGGGAGCAGCATCTCGAGACCTGAAAAAACATGGAGCAATCACAAGTAGCAATA CAGCAACTAATAACGCTGCTTGTGCCTGGCTAGAAGCACAAGAGGAAGAGGAAGAGGGTTTTCCAGTCAG ACCACAGGTACCTTTAAGACCAATGACTTACAAGGGAGCTTTAGATCTTAGCCACTTTTTAAAAGAAAAG GGGGGACTGGAAGGGTTAATTTACTCCCCAAAAAGACAAGAGATCCTTGATCTGTGGGTCTACCACACAC AAGGCTACTTCCCTGATTGGCAGAACTACACACCAGGGCCAGGGGTCAGATATCCACTGACCTTTGGATG GTGCTTCAAGTTAGTACCAGTTGAACCAGATGAAGAAGAGAACAGCAGCCTGTTACACCCTGCGAGCCTG CATGGGACAGAGGACACGGAGAGAGAAGTGTTAAAGTGGAAGTTTGACAGCCATCTAGCATTTCATCACA AGGCCCGAGAGCTGCATCCGGAGTACTACAAAGACTGCTGACACCGAGTTTTCTACAAGGGACTTTCCGC TGGGGACTTTCCAGGGAGGCGTGACCTGGGCGGGACTGGGGAGTGGCTGGGGAGTGGCGAGCCCTCAGAT GCTGCATATAAGCAGCCGCTTTTTGCCTGTACTGGCTCTCTCTGGTTAGACCAGATCTGAGCCTGGGAGC TCTCTGGCTAGCTAGGGAACCCACTGCTTAAGCCTCAATAAAGCTT
    Click to Show/Hide